Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04- 25] 7,075 sequences; 12,875,875 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2518 113 3e-20 >seq2518 Length=33988 Score = 113 bits (124), Expect = 3e-20 Identities = 166/232 (72%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | || || ||||| || || | |||||||| || | Sbjct 12514 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 12455 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || || |||| | |||| || ||||| |||||| | || |||||||| Sbjct 12454 GATACCATCGACAACGTTAAGTCGAAAA-TTCAAGACAAGGAAGGTATCCCTCCAGATCA 12396 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACG----AACGCACTTTAGGCGATT 23785 ||| | || || |||||||| || || || ||||||| ||||| | | |||| Sbjct 12395 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCT----GATT 12340 Query 23786 ACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||||| || || |||||||| |||||| | || ||||| | |||| || Sbjct 12339 ACAACATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 12288 Score = 105 bits (116), Expect = 5e-18 Identities = 139/192 (72%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 23650 ACTCTCGAAGTTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAA 23709 || || || ||||| || | |||||| |||| | | ||| |||||| ||||| Sbjct 12051 ACCCTAGAGGTTGAATCTTCCGACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAG 11992 Query 23710 GAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGAC--- 23766 |||||| | || ||||||||||| | || || |||||||| || |||||||||||| Sbjct 11991 GAAGGTATTCCTCCAGATCAACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGT 11932 Query 23767 -GAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 |||||| | | ||||| ||||| || |||||||| || || ||||| || || || Sbjct 11931 AGAACGCTGTCT----GATTATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAG 11876 Query 23826 GTTGCGAGGAGG 23837 ||| |||| || Sbjct 11875 ATTGAGAGGTGG 11864 Score = 91.5 bits (100), Expect = 1e-13 Identities = 116/157 (74%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| || | || || ||||| |||||| | || ||||| ||| | Sbjct 12286 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 12227 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || |||| | |||| | ||||| |||||| | || |||||||| Sbjct 12226 GACACGATCGATAACGTTAAGTCGAAAA-TCCAGGACAAGGAAGGTATCCCTCCAGATCA 12168 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGAC 23766 |||| | || || |||||||| || || || |||||| Sbjct 12167 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGAC 12131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337980454594100