Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04-
25] 7,075 sequences; 12,875,875 total letters
Query= NC_030917.1
Length=93577
Score E
Sequences producing significant alignments: (Bits) Value
seq1967 553 9e-153
seq241 316 1e-81
seq5541 187 1e-42
seq822 91.5 9e-14
>seq1967
Length=687
Score = 553 bits (612), Expect = 9e-153
Identities = 509/644 (79%), Gaps = 0/644 (0%)
Strand=Plus/Plus
Query 78221 GCCATCAACTGGAACAAGGTCACCGACGAGGTCGACGACACCGTGTGGGATCGACTCACC 78280
|| |||||||||||| || |||||| ||| | |||||||| || ||| |
Sbjct 44 GCGATCAACTGGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCGTC 103
Query 78281 GGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACATCCCATCCTGGGACACC 78340
|| ||||||||| |||||||||| || |||||||| |||||||||| || ||| ||||
Sbjct 104 GGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACACG 163
Query 78341 CTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACCGGCCTCACCCTGCTCGAC 78400
|| || || | ||| |||| ||||| ||||| || ||||||||||| || ||||| |||
Sbjct 164 CTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGGAC 223
Query 78401 ACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACACCCCGCACGAG 78460
|| ||||||||||| || ||||| | ||||||||| ||||||| | ||| |||||||||
Sbjct 224 ACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAG 283
Query 78461 GAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTCCTACAGCTCG 78520
|| |||||| ||||||||||||||||||||||||||| ||||||||| |||| |||
Sbjct 284 GAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCG 343
Query 78521 ATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCGTTCCGTTGGTCGGAGGAG 78580
|||||||| ||||| |||||| | |||| ||||| |||||||| ||||||||||||
Sbjct 344 ATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGAG 403
Query 78581 AACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTACTACCGCGGCGACGACCCC 78640
||| | |||| |||||||||||| |||||||| ||||||||||| |||||| ||
Sbjct 404 AACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGCCG 463
Query 78641 TTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTCTTCTACTCGGGCTTCTAC 78700
| ||||| ||||| || || ||||| || ||| |||||||||||||| |||||||||
Sbjct 464 CTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTCCTCTTCTACTCCGGCTTCTAC 523
Query 78701 CTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACCGCGGACGTGATCCGGTTG 78760
|||||||||||||||||| |||||||||||||||||||| || ||| | ||||| |
Sbjct 524 CTGCCGATGTACTGGTCGTCGCGCGCCAAGCTGACGAACACGGCCGACCTCATCCGCCTC 583
Query 78761 ATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATACAAGTACCAGCGAGGCCTC 78820
|| ||||| ||||| || || || |||||||||||||| ||||||| |||| || |||
Sbjct 584 ATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGTCTC 643
Query 78821 GAGACCCAGGGGCCGGCGCGGCAGGCTGAGCTCAAGGAGTACAC 78864
|||| | |||| | || | |||||||||| ||||||
Sbjct 644 GAGAAGCTCTCCCCGGAGGAGCGCGACGAGCTCAAGGCGTACAC 687
>seq241
Length=388
Score = 316 bits (350), Expect = 1e-81
Identities = 264/316 (84%), Gaps = 8/316 (3%)
Strand=Plus/Minus
Query 78848 GAGCTCAAGGAGTACACGTTCGATCTGCTCTCGGAGCTCTACGACAACGAGTGTG-ACTA 78906
|||||||||| |||||||||||| ||||||| ||||| ||||| |||||| ||| | ||
Sbjct 358 GAGCTCAAGGCGTACACGTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAG-GTGCAGTA 300
Query 78907 CACCGAGCAGCTCTATGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTA 78966
||| ||| | ||||| |||| |||||| || |||||||| ||||||||||||||||| ||
Sbjct 299 CACGGAGGACCTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGCGGTA 240
Query 78967 CAACGGCAACAAGGCGCTGATGAACCTCGGCTACGAAGCACTGTTCCCCAAGGAAGAGAC 79026
||||| |||||||||||| ||||||||||||||||| || || ||||||||||| |||||
Sbjct 239 CAACGCCAACAAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTCCCCAAGGACGAGAC 180
Query 79027 C-ATGGCAGACCCGGCCATCATGTCCGCGCTCTCACCAGGCGGCGACGAGAACCACGACT 79085
| | | || ||||||| ||| | || ||||| || || || |||||||||||||||||
Sbjct 179 CGACGTCA-ACCCGGCGATCCTCTCGGCGCTGTCGCCGAACGCCGACGAGAACCACGACT 121
Query 79086 TCTTCTCCGGGTCGGGCTCGAGCTACGTCATCGGCAAAGC--TGAAGCCACGGCAGATGA 79143
||||||||||||| |||||| |||||||||||||| || |||| ||| | || ||
Sbjct 120 TCTTCTCCGGGTCCGGCTCGTCGTACGTCATCGGCAAGGCCGTGAA--CACCGAGGACGA 63
Query 79144 GGACTGGGACTTCTGA 79159
|||||||||||||||
Sbjct 62 CGACTGGGACTTCTGA 47
>seq5541
Length=284
Score = 187 bits (206), Expect = 1e-42
Identities = 212/284 (75%), Gaps = 3/284 (1%)
Strand=Plus/Plus
Query 69685 TCACGCCCTCCGGTGCCGCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTCG 69744
|||| ||||| ||||| ||||| || |||||||| || ||||| || |||||| |||||
Sbjct 1 TCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTCG 60
Query 69745 ACAAGCAGTCGAACGAGTGGAAGGATGCCGAGGCACTCTTCCTGCGCTGCAACGTCTGGC 69804
|| |||||||||||||||||||| | || | || ||| |||||||| ||||||
Sbjct 61 ACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGC 120
Query 69805 GCGAGTACGCCGAGAACGTGACTGAGTCGCTCCAGAAGGGCGCCCGCGTCATCGTCCAGG 69864
||||| ||| |||||||| | |||||||| ||||||| ||||||||||| ||||
Sbjct 121 GCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGG 180
Query 69865 GCAAGCTCAAGCAGCGGTCCTACGAGA---AGGATGGCCAGCCGCGCACCACCTTCGAGC 69921
|| ||| ||||| || ||||||| || || || ||||||| | ||||||
Sbjct 181 GCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGC 240
Query 69922 TCGAGGTTGAGGAGATCGGCCCCGCACTCCGGTACGCCACCGCC 69965
| |||| || |||||| | ||| | || || |||||| | |||
Sbjct 241 TGCAGGTGGACGAGATCTGTCCCTCCCTGCGCTACGCCTCTGCC 284
>seq822
Length=666
Score = 91.5 bits (100), Expect = 9e-14
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 69624 ATGGCAAATGACACCGTCATCACCGTCATCGGTAACCTGACCGCCGACCCCGAACTCCGG 69683
|||||| ||||||||||||||| || ||||| ||||| || | ||||| || || ||
Sbjct 100 ATGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGT 41
Query 69684 TTCACGCCCTCCGGTGCCGCGGTCGCGAACTTCACCGT 69721
||||| ||||| ||||| ||||| || |||||||| ||
Sbjct 40 TTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGT 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 299295790527350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |