Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04- 25] 7,075 sequences; 12,875,875 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq1967 553 9e-153 seq241 316 1e-81 seq5541 187 1e-42 seq822 91.5 9e-14 >seq1967 Length=687 Score = 553 bits (612), Expect = 9e-153 Identities = 509/644 (79%), Gaps = 0/644 (0%) Strand=Plus/Plus Query 78221 GCCATCAACTGGAACAAGGTCACCGACGAGGTCGACGACACCGTGTGGGATCGACTCACC 78280 || |||||||||||| || |||||| ||| | |||||||| || ||| | Sbjct 44 GCGATCAACTGGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCGTC 103 Query 78281 GGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACATCCCATCCTGGGACACC 78340 || ||||||||| |||||||||| || |||||||| |||||||||| || ||| |||| Sbjct 104 GGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACACG 163 Query 78341 CTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACCGGCCTCACCCTGCTCGAC 78400 || || || | ||| |||| ||||| ||||| || ||||||||||| || ||||| ||| Sbjct 164 CTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGGAC 223 Query 78401 ACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACACCCCGCACGAG 78460 || ||||||||||| || ||||| | ||||||||| ||||||| | ||| ||||||||| Sbjct 224 ACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAG 283 Query 78461 GAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTCCTACAGCTCG 78520 || |||||| ||||||||||||||||||||||||||| ||||||||| |||| ||| Sbjct 284 GAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCG 343 Query 78521 ATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCGTTCCGTTGGTCGGAGGAG 78580 |||||||| ||||| |||||| | |||| ||||| |||||||| |||||||||||| Sbjct 344 ATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGAG 403 Query 78581 AACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTACTACCGCGGCGACGACCCC 78640 ||| | |||| |||||||||||| |||||||| ||||||||||| |||||| || Sbjct 404 AACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGCCG 463 Query 78641 TTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTCTTCTACTCGGGCTTCTAC 78700 | ||||| ||||| || || ||||| || ||| |||||||||||||| ||||||||| Sbjct 464 CTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTCCTCTTCTACTCCGGCTTCTAC 523 Query 78701 CTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACCGCGGACGTGATCCGGTTG 78760 |||||||||||||||||| |||||||||||||||||||| || ||| | ||||| | Sbjct 524 CTGCCGATGTACTGGTCGTCGCGCGCCAAGCTGACGAACACGGCCGACCTCATCCGCCTC 583 Query 78761 ATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATACAAGTACCAGCGAGGCCTC 78820 || ||||| ||||| || || || |||||||||||||| ||||||| |||| || ||| Sbjct 584 ATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGTCTC 643 Query 78821 GAGACCCAGGGGCCGGCGCGGCAGGCTGAGCTCAAGGAGTACAC 78864 |||| | |||| | || | |||||||||| |||||| Sbjct 644 GAGAAGCTCTCCCCGGAGGAGCGCGACGAGCTCAAGGCGTACAC 687 >seq241 Length=388 Score = 316 bits (350), Expect = 1e-81 Identities = 264/316 (84%), Gaps = 8/316 (3%) Strand=Plus/Minus Query 78848 GAGCTCAAGGAGTACACGTTCGATCTGCTCTCGGAGCTCTACGACAACGAGTGTG-ACTA 78906 |||||||||| |||||||||||| ||||||| ||||| ||||| |||||| ||| | || Sbjct 358 GAGCTCAAGGCGTACACGTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAG-GTGCAGTA 300 Query 78907 CACCGAGCAGCTCTATGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTA 78966 ||| ||| | ||||| |||| |||||| || |||||||| ||||||||||||||||| || Sbjct 299 CACGGAGGACCTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGCGGTA 240 Query 78967 CAACGGCAACAAGGCGCTGATGAACCTCGGCTACGAAGCACTGTTCCCCAAGGAAGAGAC 79026 ||||| |||||||||||| ||||||||||||||||| || || ||||||||||| ||||| Sbjct 239 CAACGCCAACAAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTCCCCAAGGACGAGAC 180 Query 79027 C-ATGGCAGACCCGGCCATCATGTCCGCGCTCTCACCAGGCGGCGACGAGAACCACGACT 79085 | | | || ||||||| ||| | || ||||| || || || ||||||||||||||||| Sbjct 179 CGACGTCA-ACCCGGCGATCCTCTCGGCGCTGTCGCCGAACGCCGACGAGAACCACGACT 121 Query 79086 TCTTCTCCGGGTCGGGCTCGAGCTACGTCATCGGCAAAGC--TGAAGCCACGGCAGATGA 79143 ||||||||||||| |||||| |||||||||||||| || |||| ||| | || || Sbjct 120 TCTTCTCCGGGTCCGGCTCGTCGTACGTCATCGGCAAGGCCGTGAA--CACCGAGGACGA 63 Query 79144 GGACTGGGACTTCTGA 79159 ||||||||||||||| Sbjct 62 CGACTGGGACTTCTGA 47 >seq5541 Length=284 Score = 187 bits (206), Expect = 1e-42 Identities = 212/284 (75%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 69685 TCACGCCCTCCGGTGCCGCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTCG 69744 |||| ||||| ||||| ||||| || |||||||| || ||||| || |||||| ||||| Sbjct 1 TCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTCG 60 Query 69745 ACAAGCAGTCGAACGAGTGGAAGGATGCCGAGGCACTCTTCCTGCGCTGCAACGTCTGGC 69804 || |||||||||||||||||||| | || | || ||| |||||||| |||||| Sbjct 61 ACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGC 120 Query 69805 GCGAGTACGCCGAGAACGTGACTGAGTCGCTCCAGAAGGGCGCCCGCGTCATCGTCCAGG 69864 ||||| ||| |||||||| | |||||||| ||||||| ||||||||||| |||| Sbjct 121 GCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGG 180 Query 69865 GCAAGCTCAAGCAGCGGTCCTACGAGA---AGGATGGCCAGCCGCGCACCACCTTCGAGC 69921 || ||| ||||| || ||||||| || || || ||||||| | |||||| Sbjct 181 GCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGC 240 Query 69922 TCGAGGTTGAGGAGATCGGCCCCGCACTCCGGTACGCCACCGCC 69965 | |||| || |||||| | ||| | || || |||||| | ||| Sbjct 241 TGCAGGTGGACGAGATCTGTCCCTCCCTGCGCTACGCCTCTGCC 284 >seq822 Length=666 Score = 91.5 bits (100), Expect = 9e-14 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 69624 ATGGCAAATGACACCGTCATCACCGTCATCGGTAACCTGACCGCCGACCCCGAACTCCGG 69683 |||||| ||||||||||||||| || ||||| ||||| || | ||||| || || || Sbjct 100 ATGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGT 41 Query 69684 TTCACGCCCTCCGGTGCCGCGGTCGCGAACTTCACCGT 69721 ||||| ||||| ||||| ||||| || |||||||| || Sbjct 40 TTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299295790527350