Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04- 25] 7,075 sequences; 12,875,875 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq4644 230 1e-55 seq6883 132 3e-26 seq6882 116 2e-21 >seq4644 Length=328 Score = 230 bits (254), Expect = 1e-55 Identities = 222/285 (78%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 1149 ACCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTGACCTCAGCGACATGG 1208 |||| |||||||| ||| || | || ||||| ||||||||||| || || ||||||| Sbjct 293 ACCCCGACTCGCGACGGCACATCGTCTCCGCGTGGAACGTCGGGGAGATCGAGGACATGG 234 Query 1209 CACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCGCTGC 1268 | || | ||||||||| | |||||| | ||||| | |||||||||||||||| | Sbjct 233 CGCTGCCGCCGTGCCACGCGTTCTTCCAGTTCTACGTGGCCGACGGCCGGCTCTCGTGCC 174 Query 1269 AGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACG 1328 || ||||||||||| |||||| | |||||||| ||||||||||| ||||| ||||||| Sbjct 173 AGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCGTCGTACG 114 Query 1329 CGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGA 1388 |||| |||| |||||| |||| |||| ||||||| ||| || || | | |||| Sbjct 113 CGCTGCTCGTCCACATGGTCGCCGCGCAGACCGGCCTCGAGGTCGGCGACTTCGTGTGGA 54 Query 1389 CCGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGGCGC 1433 |||| |||||| ||||||||| ||||||||||||| |||| || Sbjct 53 CCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGGTGC 9 >seq6883 Length=169 Score = 132 bits (146), Expect = 3e-26 Identities = 129/166 (78%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 801 TGCGCGACATCCTGGAGACTGGCAAGTCGAAGGATGATCGCACCGGCACCGGCACGCTGA 860 |||||||| |||||| | |||| | | |||| || ||||| || || ||||||| | Sbjct 1 TGCGCGACGTCCTGGCGCACGGCACGCCCAAGGGCGACCGCACGGGGACGGGCACGCGCA 60 Query 861 GCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACCGAGGGCTTCCCGCTGGTCACCACGA 920 || ||||||| |||||| || | ||||||| | ||||||||||||| |||| |||| Sbjct 61 GCGTGTTCGGCCGCCAGCTCCGCTTCGACCTCGCGCAGGGCTTCCCGCTCATCACGACGA 120 Query 921 AGCGCGTCCACTTCAAATCGGTTGCGTACGAACTTCTGTGGTTCCT 966 ||||||| ||| |||| || || || ||||| || ||||||||||| Sbjct 121 AGCGCGTGCACCTCAAGTCCGTCGCCTACGAGCTGCTGTGGTTCCT 166 >seq6882 Length=157 Score = 116 bits (128), Expect = 2e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 933 TCAAATCGGTTGCGTACGAACTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGC 992 |||| || || || ||||| || ||||||||||| | |||||| |||||||| || Sbjct 156 TCAAGTCCGTCGCCTACGAGCTGCTGTGGTTCCTGCGCGGCGACTCGAACGTGCGCTGGC 97 Query 993 TCAACGACAACGGCGTCACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTC 1052 || | || |||||| |||||||||||||||||||||||||| ||| | ||||| | Sbjct 96 TCCAGGAGCGCGGCGTGCGCATCTGGGACGAGTGGGCCGACGCCGACGGCGAGCTCGGCC 37 Query 1053 CTGTCTACGGCGCGCAGTGGCG 1074 | |||||||||| |||||||| Sbjct 36 CCGTCTACGGCGTCCAGTGGCG 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296105665624575