Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04- 25] 7,075 sequences; 12,875,875 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2518 118 8e-22 seq114 109 4e-19 seq2623 93.3 3e-14 >seq2518 Length=33988 Score = 118 bits (130), Expect = 8e-22 Identities = 172/237 (73%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| |||||| || ||||||||||||||||| Sbjct 11629 TTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTA 11688 Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | | | || || || ||||| || ||||| ||||| | ||| |||| Sbjct 11689 GTCAGACAAGGT-TCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGAT 11747 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTT-CTGCTTCAATGTT-CCTATGGTGTCGGC 44280 | | ||| | |||||| || || ||||| || || | ||| | || ||||||| Sbjct 11748 CCGGAGGGATACCTTCTTTATCTTGAATCTTACT--TTTGACGTTGTCAATAGTGTCGGA 11805 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| | || || ||||| || || || || || ||||| |||||||| Sbjct 11806 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 11862 Score = 114 bits (126), Expect = 9e-21 Identities = 168/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || || | ||| || || | ||| |||||| || ||||||||||| Sbjct 12284 CATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATC 12343 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || | |||| || |||||||| |||||||||||||| | || ||||||| Sbjct 12344 AGACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGG 12403 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285 ||| | ||||||||| || || ||| ||| || ||| | ||||| |||| |||| Sbjct 12404 AGGGATACCTTCCTTGTCTTGAATTTTCGACTT-AACGTTGTCGATGGTATCGGAAGATT 12462 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 | || |||| || || || || || || | ||||| ||||| || ||||| || Sbjct 12463 CAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 12517 Score = 105 bits (116), Expect = 5e-18 Identities = 119/157 (76%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 44182 GTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTT 44241 ||| || |||||||| |||||||||||||| | ||| ||||||| ||| | ||||||||| Sbjct 12131 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 12190 Query 44242 TTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAA 44300 ||| || ||| ||| || ||| | || ||||||| |||||| ||||| | || | Sbjct 12191 GTCCTGGATTTTCGACTT-AACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGA 12249 Query 44301 TCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || || | ||||| || ||||| ||||| Sbjct 12250 TGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 12286 Score = 87.8 bits (96), Expect = 1e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| || | ||| ||| || || ||||| || Sbjct 11857 TTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATA 11916 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || | |||| ||||| ||||| |||||||| ||||| | || ||||| Sbjct 11917 ATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATC 11976 Query 44224 TGAAGGCACACCTTCCTTTTC 44244 || ||| | ||||||||| || Sbjct 11977 TGGAGGAATACCTTCCTTGTC 11997 >seq114 Length=22662 Score = 109 bits (120), Expect = 4e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| |||| ||| || || ||||||||||||||||| |||| Sbjct 8689 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8630 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | | || |||| ||||| || ||||||||||| | || || || | | Sbjct 8629 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 8572 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||||||||| || ||||| ||| || ||| | || ||||| | ||||| Sbjct 8571 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATAGTGTCAGAAGATTC 8514 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 8513 AACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8463 >seq2623 Length=54717 Score = 93.3 bits (102), Expect = 3e-14 Identities = 156/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||| | |||||| |||| || | ||| ||||||||||||||||| || Sbjct 37374 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 37433 Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | ||||| | |||| |||| ||||| || ||||||||||| | || || || | Sbjct 37434 GATAGAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAG 37491 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 || | ||||||||| || ||||| ||| | | | |||||||| | |||| Sbjct 37492 GTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTATCAATGGTGTCAGAAGATT 37551 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329 | || |||| || || ||||| || || | ||||| |||||| Sbjct 37552 CAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 37595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359959359265275