Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177985.1_202017-04- 25] 2,056 sequences; 11,515,417 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq780 147 2e-30 >seq780 Length=7335 Score = 147 bits (162), Expect = 2e-30 Identities = 340/507 (67%), Gaps = 9/507 (2%) Strand=Plus/Minus Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 || || ||||||| || | |||||| ||||| ||||| || ||||||| |||| ||| Sbjct 6865 CCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTT 6806 Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 13800 || ||||| || || | || || || ||||| || || | || |||| | ||||| Sbjct 6805 TTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAG 6746 Query 13801 GCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCATTTTCTAGCCCATTC 13859 || | ||||| ||| |||||| | || | || |||| |||||| || ||||||||| Sbjct 6745 GCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATTC 6687 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTT 13919 | || | || || || | || |||||||| || ||| | ||||| Sbjct 6686 GGCCTTCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTT 6627 Query 13920 AG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCT 13977 || | ||||| |||| ||||| || | ||| || |||||||||| || ||||| Sbjct 6626 AGGGTCCTTGA--TGTAAGTATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCA 6569 Query 13978 ATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAAT 14037 || || || ||||| || |||| | || |||| ||| || || | | | || Sbjct 6568 ATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAG 6509 Query 14038 CTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTT 14097 |||| |||||||||||||||||||||| ||| ||| || ||||| || | | | Sbjct 6508 TTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTG 6449 Query 14098 TTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGCTAAATCCTTAGAA 14154 ||| || || ||| | | ||| | | || ||||| || | ||||||||| Sbjct 6448 GAAATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGAC 6389 Query 14155 AGATCTACTTCATCAACTGTCCAAAAA 14181 | ||| | ||| ||| | ||||| ||| Sbjct 6388 AAATCAATTTCTTCAGCGGTCCAGAAA 6362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478576500267840