Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177985.1_202017-04-
25] 2,056 sequences; 11,515,417 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq1543 105 6e-18
seq1034 84.2 2e-11
>seq1543
Length=21964
Score = 105 bits (116), Expect = 6e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| |||| || || | || || | || || ||| | |
Sbjct 9909 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 9968
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || ||| |||||| || || || ||||| || || |||||
Sbjct 9969 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 10028
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | |||| | ||| || ||||| ||||| | ||||| |||| | |||| |
Sbjct 10029 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTG--ATTATA 10086
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| ||||| ||||| || || | ||||| ||||| ||||||||||| ||
Sbjct 10087 ACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 10135
Score = 105 bits (116), Expect = 6e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| |||| || || | || || | || || ||| | |
Sbjct 10137 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 10196
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || ||| || ||| |||||||| ||||| || || |||||
Sbjct 10197 GACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 10256
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|| ||| | |||| | || || ||||| ||||||| ||||| |||| | | ||||
Sbjct 10257 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTG--ACTACA 10314
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| || ||||| ||||| || |||| || ||||| ||||||||||| ||
Sbjct 10315 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 10363
Score = 102 bits (112), Expect = 7e-17
Identities = 169/242 (70%), Gaps = 4/242 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| || ||| | || || || | || || | || || ||| |
Sbjct 10365 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 10424
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || || |||||| || || || ||||| || || || |||
Sbjct 10425 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 10484
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | |||| | ||| || ||||| ||||||| ||||| |||| | | ||||
Sbjct 10485 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGG--ACTACA 10542
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGATCAT 25412
|||||||||| || ||||| |||| | || || || ||||| || || || ||||||
Sbjct 10543 ATATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTAACTGATCAG 10602
Query 25413 TC 25414
||
Sbjct 10603 TC 10604
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| || || || ||||| ||| | ||||| | || || ||| || |
Sbjct 9681 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 9740
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || || ||||| || || || ||||| || || |||||
Sbjct 9741 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 9800
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|| || | || | | ||| || || || ||||| | ||||| |||| | | ||||
Sbjct 9801 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTG--ACTACA 9858
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| || ||||| ||||| || |||| || ||||| ||||||||||| ||
Sbjct 9859 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 9907
>seq1034
Length=15365
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| |||||| | || || || || |||||||| || | || || | ||||| ||| |
Sbjct 8442 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 8501
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
|| ||||| || | || || || || || || || ||||| || || ||
Sbjct 8502 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 8561
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
|| |||||| | || | | || || ||| | ||||||| ||||| | | ||| ||
Sbjct 8562 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 8621
Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||| || ||||| ||||| || | || || || || ||||||||||| ||
Sbjct 8622 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 8672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445082961073920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |