Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177985.1_202017-04- 25] 2,056 sequences; 11,515,417 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1538 293 3e-74 >seq1538 Length=13125 Score = 293 bits (324), Expect = 3e-74 Identities = 909/1389 (65%), Gaps = 42/1389 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| || || | ||| |||||| || |||||||||| |||||| ||||| | ||||| Sbjct 2621 GTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGA 2680 Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG-CG 110823 || || |||||||||||||| || || | | | || ||| | || | |||| | Sbjct 2681 TGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT--CTAACACCATGCTTCATGATATCT 2738 Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 || ||| || ||||| || | || | || || |||||||| |||||||| Sbjct 2739 TTTCTTAAGGTG-TCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTG 2797 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941 || | ||||| || || ||||| || | || ||||| || | ||| | |||| | Sbjct 2798 TAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGA 2855 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 || | |||||| || |||| ||| || ||||| || ||||||||||| | ||| Sbjct 2856 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTT 2915 Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 | | |||||| || |||||||||| | || ||| || || || |||||| Sbjct 2916 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 2975 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121 ||||||||||||||| |||| ||||| |||| |||||| || |||| ||| ||||| Sbjct 2976 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 3035 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 || || |||| | |||||||||| ||||| ||| ||||||| || | |||||| Sbjct 3036 GGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCA 3095 Query 111182 TGAAGTTTTTCATAATCAAAAGTGCGAGTCT---------------CTTCATTGACATAC 111226 || | ||||| | | | ||| ||||| |||| ||| || | Sbjct 3096 TGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC 3154 Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286 ||| | ||| | || ||||| || |||||||| || ||||| | ||| ||| || Sbjct 3155 --TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCA 3212 Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346 | |||||| |||||||| || ||| || || || || ||||| ||| || Sbjct 3213 ACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTT 3272 Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406 |||| || ||||||||||| | | | | || || || || || || || | || | | Sbjct 3273 CTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAA 3332 Query 111407 ATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466 || | | ||| | || || | | || | || | || || || |||||| Sbjct 3333 ATGGAATACCATA-ATTTTTGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAG 3389 Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTC 111525 || || || || |||||||| ||||| ||| | ||| || || ||| Sbjct 3390 CGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT- 3448 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 |||| |||| | | ||| ||| ||| || || |||||||||||||| || ||||| Sbjct 3449 TGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAAT 3508 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||| || | | || | |||||| ||| || || | ||| ||||| || ||| Sbjct 3509 CCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAA 3567 Query 111646 -CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC-- 111702 |||| || || | ||||| || |||||||| || || || | || | | || Sbjct 3568 TATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAG 3627 Query 111703 --CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760 |||| | ||| | || | ||||| || || ||| || || || |||| ||| Sbjct 3628 GTCTTT-TATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATA 3686 Query 111761 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 111820 ||||| | ||| | || ||| ||||| || ||| ||| | | | | | Sbjct 3687 GGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATG 3746 Query 111821 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 111880 | |||||| || | |||||||| ||||| || || || ||||| ||| | | Sbjct 3747 TTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAG 3806 Query 111881 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 111940 || | || || || | ||| ||||||||||| |||| | | ||| ||| |||||| Sbjct 3807 GTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATT 3866 Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-G 111999 || ||| |||| ||||| |||||||| | ||||| | |||||| | || ||| || | Sbjct 3867 TGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAG 3925 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 |||||| || || || || || ||| || || ||| ||||||||||| | ||| Sbjct 3926 AGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGC 3985 Query 112060 GACCCGCAT 112068 ||| | ||| Sbjct 3986 GACTCTCAT 3994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628015859577600