Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177995.1_202017-04-
25] 1,509 sequences; 11,584,921 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq603 107 2e-18
seq1366 100 2e-16
seq600 95.1 1e-14
>seq603
Length=424
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || ||||| |||| ||| ||| ||||||||||| || || |
Sbjct 212 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 271
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| | | |||| |||||||| || ||||| || ||||| | ||||| || |||||
Sbjct 272 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 331
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||| |||||||| |||||| |||||| | | |||| | || |||
Sbjct 332 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAACC 391
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTT 45321
|| | ||| || ||||| || ||||| |||||
Sbjct 392 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTT 423
>seq1366
Length=22619
Score = 100 bits (110), Expect = 2e-16
Identities = 165/236 (70%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || |||||||| || || ||||| || |||||||||||| |
Sbjct 8706 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8647
Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | | | || |||| ||| || || || || ||||| | |||||||| || |
Sbjct 8646 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 8589
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| |||||||| || || ||| || | | |||| | || |
Sbjct 8588 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 8529
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343
| |||| |||||| ||||| || || | |||||| || || |||||||| ||| ||
Sbjct 8528 CTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTGGCT 8473
>seq600
Length=53727
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || || ||||||| ||| || || |||||||||||||| |
Sbjct 35976 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 36035
Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
| ||| | | |||| |||| ||| || || || || ||||| | |||||||| || |
Sbjct 36036 AAGGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 36093
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| |||||||| ||| ||| ||| || | | |||| | || |
Sbjct 36094 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 36153
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAA 45327
| |||| || || ||||| || |||| |||||| |||||
Sbjct 36154 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 36193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395067934196689
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |