Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177995.1_202017-04- 25] 1,509 sequences; 11,584,921 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq1366 95.1 9e-15 seq603 87.8 1e-12 seq1180 84.2 2e-11 >seq1366 Length=22619 Score = 95.1 bits (104), Expect = 9e-15 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||| |||||||| || | || || ||||| || || || |||||| ||||| ||| | Sbjct 8476 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 8535 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGT 21946 | || || | | | || | ||| || || || || || ||| | ||||| Sbjct 8536 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTG- 8594 Query 21947 AAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGA 22006 ||||||| ||| | ||||||||||| || ||| | |||||| | |||| || |||| Sbjct 8595 --ACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGA 8652 Query 22007 TTACAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || || |||||||||||||| || |||| || Sbjct 8653 CTACAACATCCAAAAGGAATCTACTCTACACTTGGTCTT 8691 >seq603 Length=424 Score = 87.8 bits (96), Expect = 1e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 |||||||| ||| | ||| | ||||||||| | || |||||||| || ||||||||| Sbjct 117 GATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAGCAACTAGAA 58 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGT 22042 ||| | ||| || | || ||||| || || ||||||||||||||||| |||| Sbjct 57 GATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCACTTGGT 2 >seq1180 Length=21872 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| |||| || || || || |||||||| || | || ||| || | Sbjct 21663 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 21722 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | | ||||| ||||| || || || ||| | ||| | | ||| Sbjct 21723 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 21782 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| | |||||||| || || || |||||||| | ||| || | || ||||| Sbjct 21783 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 21842 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGT 22042 || || ||||||||||||||||| |||| Sbjct 21843 ATCCAAAAGGAATCTACTCTTCACTTGGT 21871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358118213749186