Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177995.1_202017-04- 25] 1,509 sequences; 11,584,921 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq805 132 1e-25 seq304 87.8 4e-12 >seq805 Length=3351 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 334137 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 334196 |||| |||||||||||| ||| |||| | ||||| || ||||||||| |||| Sbjct 1719 TCGATATCGTGTTCCACATAAACAGTGCGACATTCATCCTGAGTGGGGAACCCGTCAACT 1778 Query 334197 TGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 334256 || || || |||| | ||||| ||||| ||||| || || || || || ||||| ||| Sbjct 1779 TGGCCATTAGCAATGGATCGCATTAGAGTGGATTTTCCGGCACCATTAGGACCACATAGA 1838 Query 334257 CCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCA 334316 || || | | || ||||||| | || | || ||||| || | ||||| ||||| Sbjct 1839 CCATATCTTCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTAGTAATATTTTGGCACCA 1898 Query 334317 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 ||||||| ||||||||||||| ||||| ||| ||||| Sbjct 1899 TATGCCAAGGAAAATTCACAATTACACAAATCTTCACC 1936 >seq304 Length=55575 Score = 87.8 bits (96), Expect = 4e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 334182 GGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCG 334241 ||||| || |||| |||||||| ||||||| | ||| | ||| || ||||| ||| Sbjct 43796 GGGAAACCATCAACTTGACCGTTGGCAATAGCTCTCATTAAAGTGGACTTACCACAACCG 43855 Query 334242 TTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGA 334301 ||||| ||||| | ||| || | | | | ||||| | || | || ||||||| Sbjct 43856 TTTGGACCACAGATACCATATCTTCTGGCTCTCTTCAATCTTAATTGGGTCTTGTTCAAC 43915 Query 334302 AGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 | ||||| ||||||| |||| |||||||||||| | ||| | || ||||| Sbjct 43916 AAGATTTTAGCACCATAAGCCAAAGAAAATTCACAGTTACATAAGTCTTCACC 43968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102858676849150