Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177995.1_202017-04- 25] 1,509 sequences; 11,584,921 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq1281 1429 0.0 >seq1281 Length=1369 Score = 1429 bits (1584), Expect = 0.0 Identities = 857/917 (93%), Gaps = 50/917 (5%) Strand=Plus/Plus Query 9273 GGGTTGTCGGACGAAGGGCTTGAAGATGCGCTCTACGACAGCATCGCGATGCGCGCCTTC 9332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 453 GGGTTGTCGGACGAAGGGCTTGAAGATGCGCTCTACGACAGCATCGCGATGCGCGCCTTC 512 Query 9333 GCGGGCATCGACCTGGCGCGCGAGAACGTGCCGGACGCCACCACGCTGTTGAAATTCCGG 9392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 513 GCGGGCATCGACCTGGCGCGCGAGAACGTGCCGGACGCCACCACGCTGTTGAAATTCCGG 572 Query 9393 CGCCTGCTGGTCGAGCACGCACTGACGCGAAAGCTGTTCGACGAGATCGGCATCGAGTTG 9452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 573 CGCCTGCTGGTCGAGCACGCACTGACGCGAAAGCTGTTCGACGAGATCGGCATCGAGTTG 632 Query 9453 TGCGAGCGCGGGCTGATGATGAAGGAAGGCACGCTGGTGGATGCGACGATCTTCGAGGCT 9512 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 633 TGCGAGCGCGGGCTGATGATGAAGGAAGGCACGCTGGTGGATGCGACGATCTTCGNNNNN 692 Query 9513 GCGCC--------------------------GTCCACGAAGAACGCCGGGAAGAGCCGTG 9546 ||||||||||||||||||||||||||||| Sbjct 693 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCACGAAGAACGCCGGGAAGAGCCGTG 752 Query 9547 ACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCCATG 9606 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 753 ACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCCATG 812 Query 9607 TCGGCGTCGACGCCGACTCGGGTCTGG------------------------TGCATAGCG 9642 ||||||||||||||||||||||||||| ||||||||| Sbjct 813 TCGGCGTCGACGCCGACTCGGGTCTGGNNNNNNNNNNNNNNNNNNNNNNGGTGCATAGCG 872 Query 9643 TGGTCACCACGGCGGCCAACGAGCCGGACGTATCGCAGGCCCACGCCCTGCTGCACGGTC 9702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 873 TGGTCACCACGGCGGCCAACGAGCCGGACGTATCGCAGGCCCACGCCCTGCTGCACGGTC 932 Query 9703 ATGAGCAGGAAGCGTTTGGCGATGCGGGCTACACCGGCGTGGACAAGCGCGAGGAGATGA 9762 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 933 ATGAGCAGGAAGCGTTTGGCGATGCGGGCTACACCGGCGTGGACAAGCGCGAGGAGATGA 992 Query 9763 AGGGCAAGACGGTGAAGTGGCACGTGGCGCTCAAGCGCGGAAAGATCAGGGCGATGCAGG 9822 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 993 AGGGCAAGACGGTGAAGTGGCACGTGGCGCTCAAGCGCGGAAAGATCAGGGCGATGCAGG 1052 Query 9823 AAGGTCCGCTGAAGGACCTCGTGATCGCGGTCGAGCGAACCAAGGCGCAGATCCGCGCCC 9882 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1053 AAGGTCCGCTGAAGGACCTCGTGATCGCGGTCGAGCGAACCAAGGCGCAGATCCGCGCCC 1112 Query 9883 GGGTCGAGCATCCGTTTCATGTCGTGAAGAACCTGTTTCGTCATCGCAAGGTGCGCTACA 9942 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1113 GGGTCGAGCATCCGTTTCATGTCGTGAAGAACCTGTTTCGTCATCGCAAGGTGCGCTACA 1172 Query 9943 AGGGTCTAGCCAGGAACACGGCACAGCTGTTCAGTCTGTTCGCGCTGGCGAACCTGGTGA 10002 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1173 AGGGTCTAGCCAGGAACACGGCACAGCTGTTCAGTCTGTTCGCGCTGGCGAACCTGGTGA 1232 Query 10003 TCGCGAAAAATCAGCTGTTGTCGACTCATGGGAGCAATCCGTCATGTGTGTGAAAAACGC 10062 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1233 TCGCGAAAAATCAGCTGTTGTCGACTCATGGGAGCAATCCGTCATGTGTGTGAAAAACGC 1292 Query 10063 GGGAAGTGAGGCCCGAATACGAGCGAAACTCACCTCGCATGTCGTCAAATTCCTACGTCA 10122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1293 GGGAAGTGAGGCCCGAATACGAGCGAAACTCACCTCGCATGTCGTCAAATTCCTACGTCA 1352 Query 10123 ATCTGAAAATTGCAACC 10139 ||||||||||||||||| Sbjct 1353 ATCTGAAAATTGCAACC 1369 Score = 432 bits (478), Expect = 9e-117 Identities = 244/247 (99%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 8968 GTTCCTAAGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCG 9027 || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 140 GTACCTCGGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCG 199 Query 9028 TTGTAGAAAGAAGCTCACGGAACGGACCCACGACGATGCAGCGGCAGATCGGTTTTGCGG 9087 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 200 TTGTAGAAAGAAGCTCACGGAACGGACCCACGACGATGCAGCGGCAGATCGGTTTTGCGG 259 Query 9088 AAGCGGAAAGTGCGGGCAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGG 9147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 260 AAGCGGAAAGTGCGGGCAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGG 319 Query 9148 AGAAGGTCGTCCCTTGGTCGCGGCTGCTGTCGGTGATCGGGCCGTATTACCCGAAGGGCG 9207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 320 AGAAGGTCGTCCCTTGGTCGCGGCTGCTGTCGGTGATCGGGCCGTATTACCCGAAGGGCG 379 Query 9208 AGCGTGG 9214 ||||||| Sbjct 380 AGCGTGG 386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119031466992284