Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178015.1_202017-04- 25] 3,001 sequences; 11,718,470 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2274 122 2e-22 seq1820 118 2e-21 seq2914 105 2e-17 seq2852 95.1 3e-14 seq474 86.0 1e-11 >seq2274 Length=14263 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 |||| ||||||||| ||||| ||||||||||| | |||||||| | || || || ||| Sbjct 13556 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 13615 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 ||||| || ||||| ||||| || || | | |||||||| ||| ||| ||||| Sbjct 13616 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 13675 Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 || ||||| || ||| ||| || | ||||| | | ||| || || | || || Sbjct 13676 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 13735 Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || || || || ||||||||||| Sbjct 13736 GTCTTACCTGTCAGTGTCTTGACAAAAATTTG 13767 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || || || Sbjct 13783 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 13842 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| || ||||| || || || || | | ||| || |||||| || |||||| Sbjct 13843 ATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTT 13902 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| || ||| || | ||||| | | ||| || || | || || Sbjct 13903 ATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 13962 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || |||||||| || |||||||| Sbjct 13963 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTG 13995 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || ||||| || || | ||| || |||| || || || || |||||||| ||||| ||| Sbjct 14030 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 14089 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 || || || | | || || || ||| ||| ||||| || ||||| || ||| Sbjct 14090 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 14149 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| ||||| | | ||| || || | || || |||||||| || || || Sbjct 14150 ACGTTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 14209 Query 199613 TTCACAAAAATTTG 199626 || ||||||||||| Sbjct 14210 TTGACAAAAATTTG 14223 >seq1820 Length=793 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || || || Sbjct 770 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 711 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||| |||||||| ||||| ||||| | | ||| || || ||| || ||||| Sbjct 710 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 651 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| || || ||| ||| |||| ||||| | | ||| || || || ||||| Sbjct 650 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 591 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | ||| || ||||| || || Sbjct 590 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTG 558 >seq2914 Length=53839 Score = 105 bits (116), Expect = 2e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || || Sbjct 17726 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 17667 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| || || ||||| | | || ||||| || || ||||| Sbjct 17666 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 17607 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||||||| ||| || || | ||||| | | ||| || ||||| ||||| Sbjct 17606 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 17547 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621 |||||||| || | ||| || |||||| Sbjct 17546 GGTCTTACCAGTCAAAGTCTTGACAAAA 17519 >seq2852 Length=65796 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | || | ||| || |||||||||| ||||||||||| | ||| || || Sbjct 28732 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 28673 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| || || ||||| | | || ||||| || || ||||| Sbjct 28672 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 28613 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| || || | |||||| | | ||| || ||||| ||||| Sbjct 28612 GTCTTGGATCTTGGACTTGACATTATCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 28553 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAA 199620 |||||||| || | ||| || || || Sbjct 28552 GGTCTTACCAGTCAAAGTCTTAACGAA 28526 >seq474 Length=22849 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | ||||| || || ||||| ||||||||||| || |||||| |||| |||||| Sbjct 14152 AAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACA 14093 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 |||| || || |||||||| ||| | || |||||| Sbjct 14092 TCCAAAAGGAATCTACTCTACACTTGGTCTTGAGA 14058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178876270096067