Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178015.1_202017-04- 25] 3,001 sequences; 11,718,470 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq2274 109 9e-19 seq2914 107 3e-18 seq1820 87.8 3e-12 seq2933 84.2 3e-11 >seq2274 Length=14263 Score = 109 bits (120), Expect = 9e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || ||| | ||||| || || || || | || || ||| | | Sbjct 14225 TGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTG 14166 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| | || || || ||||| ||| || ||||| ||||| || ||||||| Sbjct 14165 ACACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAAC 14106 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | |||||||| ||||| ||| | || || ||||||| | | |||||||| | Sbjct 14105 AAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACA 14046 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || ||||| || || | ||||| || || |||| ||||| |||| Sbjct 14045 TTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTA 13998 >seq2914 Length=53839 Score = 107 bits (118), Expect = 3e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105 || || || || || || || || ||| | || || ||| | || |||||| | ||| Sbjct 17526 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 17585 Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165 || || || || ||| || ||||| || ||||| || ||||||||| | || ||| Sbjct 17586 GTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 17645 Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225 || ||||| ||||| || || |||||| || | || || || || ||||||||||| Sbjct 17646 GCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCC 17705 Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 ||| | || ||||| || |||| ||||| |||| Sbjct 17706 ACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTA 17739 >seq1820 Length=793 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || || || ||||| || || | || || ||| | || Sbjct 328 TGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCCG 387 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || || || ||||| ||| || ||||| || || || ||||||| Sbjct 388 ATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAAC 447 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| ||||| || |||| || ||||||| | | ||||| || | Sbjct 448 AAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAACA 507 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || || || || || | ||| | || || | ||||||| |||| Sbjct 508 TTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 555 >seq2933 Length=169 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| ||||||| || || || || | || || ||| | || Sbjct 131 TGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCG 72 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | || || |||| |||||| ||| || ||||| ||||| || ||||||| Sbjct 71 ACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAAC 12 Query 146152 AAAGACTCATT 146162 ||||| | ||| Sbjct 11 AAAGATTGATT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786136908932920