Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04-
25] 7,290 sequences; 12,699,436 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq1339 140 2e-28
>seq1339
Length=16980
Score = 140 bits (154), Expect = 2e-28
Identities = 325/479 (68%), Gaps = 16/479 (3%)
Strand=Plus/Minus
Query 101863 ACAGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGA 101922
|| |||||| || || || | ||| || || ||||| ||||||| || || |
Sbjct 12374 ACTGACATAGAACTGTGAAAAAATATGGCATGGTGGCAAAGCCATTTTGTCAAAATCAGC 12315
Query 101923 AACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG-TTTGTTTTTATAGTATCAA 101981
||||| |||| ||| | || |||||||| |||||| ||||| |||| ||| ||
Sbjct 12314 TGGGTTCCAGGCACTCATAATGATTCTTCTATC-GTAGGGATTTGTCTTTAGTTTATGAA 12256
Query 101982 TCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATAT 102040
| | |||||| ||||| |||| |||| ||| |||| ||| | ||| | || |||
Sbjct 12255 TAACCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGTCATCG-CACGTCTTGTAT 12197
Query 102041 TCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTG 102100
| || || ||||||||||| ||||||||||| || || || ||||||||| | | ||
Sbjct 12196 TTAGCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTA 12137
Query 102101 TCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACG 102160
|| | || || | ||||||||| || | ||||||||| | |||||||| | ||
Sbjct 12136 TCTTTGAACCCCATCTTATCTAAATATTCACGAGATCCATTACCGTCCCAAATCTTAACA 12077
Query 102161 CC-AGCT--GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCT 102217
|| ||| | |||| || || ||| ||| || | ||||||||| |||||
Sbjct 12076 CCTTGCTCAGACAATAG--GTTAGC-GTCTGTATCACCGGCCAAAAACCACAATAGTTCA 12020
Query 102218 TCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCT 102274
| | |||||| ||| || |||| || |||| ||||| || |||| |
Sbjct 12019 AGTATGATACCTCTAGTAAAGACCTTCTTGGTCGTTAGTAGTGGGAAGGTATCATCACGT 11960
Query 102275 AAACTAAACCTAGACT---GTGTTCCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTC 102330
|||||||| | || ||| | |||||| ||||| || ||||| |||||||| ||
Sbjct 11959 AAACTAAAACGCAGCTGGGGTGGTGCAAAAAGACTCAACGTACCAGTGCCTGTTCTATC 11901
Score = 102 bits (112), Expect = 6e-17
Identities = 212/313 (68%), Gaps = 2/313 (1%)
Strand=Plus/Minus
Query 101542 CATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTCA-TCTGCTT 101600
||| | ||||| |||| | || || || ||||| | ||| | | || ||| || |||
Sbjct 12787 CATTTTCATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTCTGTCAACTT 12728
Query 101601 TAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGGTCTAGGAG 101660
||| ||||||||| | ||| | || || | ||| | || || ||||| |||
Sbjct 12727 GAAA-TCATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGGTCTTGGAT 12669
Query 101661 TTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTA 101720
||| | | || ||| | ||||||||||| ||| ||| | || ||||| || |
Sbjct 12668 TTCTGGAGATTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGCATCCCCCA 12609
Query 101721 TAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAA 101780
|||||| || ||||| || ||| | | | || | ||||||||| | ||| || |
Sbjct 12608 AAGTATGAATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACA 12549
Query 101781 GAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACA 101840
|| ||| |||||||||||||| ||||| |||||||||||| || | ||| ||||
Sbjct 12548 AAGCATATGATGCAATGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACA 12489
Query 101841 GTTGACAGGAAAG 101853
| || |||||
Sbjct 12488 ATAAGCATGAAAG 12476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361219103959790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |