Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1339 149 4e-31 >seq1339 Length=16980 Score = 149 bits (164), Expect = 4e-31 Identities = 214/298 (72%), Gaps = 4/298 (1%) Strand=Plus/Minus Query 97231 ACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACA 97290 ||||| ||||| || | ||| || || ||||| |||||||| || ||| Sbjct 12370 ACATAGAACTGTGAAAAAATATGGCATGGTGGCAAAGCCATTTTGTCAAAATCAGCTGGG 12311 Query 97291 TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATC 97350 ||||| |||| ||| | |||||||||||| || ||||| | || ||| ||| | | Sbjct 12310 TTCCAGGCACTCATAATGATTCTTCTATCGTAGGGATTTGTCTTTAGTTTATGAATAACC 12251 Query 97351 TGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGAC--CTTGATATTCTG 97408 || || |||||||||| |||| |||| ||| | || | | || |||| |||| | Sbjct 12250 TGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGT-CATCGCACGTCTTG-TATTTAG 12193 Query 97409 CTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCAC 97468 | ||||||||||||||||| ||||||||||| || || || |||||| ||| ||||| Sbjct 12192 CACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATCTT 12133 Query 97469 AGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC 97526 ||| || | |||||||||||| | ||||||||| | |||||||| | ||||| Sbjct 12132 TGAACCCCATCTTATCTAAATATTCACGAGATCCATTACCGTCCCAAATCTTAACACC 12075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346753189325300