Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04-
25] 7,290 sequences; 12,699,436 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1299 123 2e-23
seq1389 96.9 3e-15
seq2088 86.0 6e-12
seq1857 86.0 6e-12
seq1335 84.2 2e-11
seq1058 82.4 7e-11
>seq1299
Length=15568
Score = 123 bits (136), Expect = 2e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || |||||||||||||| || || ||| | ||| || |
Sbjct 6842 CTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 6901
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 6902 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 6961
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | ||||| ||||| || ||||| || ||||
Sbjct 6962 TCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATA 7021
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || ||||||| ||| || || ||||||||||||
Sbjct 7022 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 7057
>seq1389
Length=207
Score = 96.9 bits (106), Expect = 3e-15
Identities = 129/177 (73%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||||||| | || || || |||||||||||||| || || || | |||| || |
Sbjct 183 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 124
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | ||| || || || | ||||||| || || ||||| || || |||||||||
Sbjct 123 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTA 64
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|||||||| || ||||| || | || | ||||||||||| || || || || ||
Sbjct 63 TCTTGAATCTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGT 8
>seq2088
Length=263
Score = 86.0 bits (94), Expect = 6e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184
|||||| || || || || || || |||||||| ||||| || || | ||| ||
Sbjct 78 CCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACC 137
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| || | ||| || || || | ||||||| ||||||||| || ||||| ||||| ||
Sbjct 138 ATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 197
Query 45245 ATCTTGAATTTT 45256
|||||||||||
Sbjct 198 GTCTTGAATTTT 209
>seq1857
Length=10065
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
||||| | ||| ||||| | || || ||||| || || || ||||| | ||| ||
Sbjct 9689 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 9630
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| || | || || || || | ||||||| ||| || || || || || |||||
Sbjct 9629 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 9570
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| ||||||| |||| | | | || | || | ||| |||||||| || ||||| | ||
Sbjct 9569 TTGTCTTGAA-TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGT 9511
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| ||||| | ||| || || ||||| |||||
Sbjct 9510 TATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 9472
>seq1335
Length=21199
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||| | || |||||||||||||| || || || | ||| ||
Sbjct 17324 CTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCG 17265
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||| ||
Sbjct 17264 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 17205
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | |||||| ||||| || ||||| | ||| |
Sbjct 17204 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 17145
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331
|| || || || | ||| || || ||
Sbjct 17144 GTCTTACCAGTCAAAGTCTTAACGAA 17119
>seq1058
Length=5671
Score = 82.4 bits (90), Expect = 7e-11
Identities = 200/303 (66%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900
|||| |||||||| | ||||| || ||| ||||| || |||| | | |
Sbjct 1299 TACAGTTATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAA 1358
Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960
|| ||||||||| |||||| | | ||| | ||||| ||||| | ||||| | ||
Sbjct 1359 GTGGCCGAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGAT 1418
Query 122961 ATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGT 123020
||||| || ||||| || | |||||||||| ||||| ||| || ||||| |
Sbjct 1419 ATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCT 1478
Query 123021 CCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACC 123080
|| || |||||| ||||| || ||||| |||| || ||||| ||| | ||
Sbjct 1479 CCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCC 1538
Query 123081 TTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCC 123140
|| || ||| ||| || || || || || ||| || || || |||||||||
Sbjct 1539 ATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCC 1598
Query 123141 AAA 123143
|||
Sbjct 1599 AAA 1601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451962011208400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |