Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq5527 661 0.0 >seq5527 Length=819 Score = 661 bits (732), Expect = 0.0 Identities = 398/419 (95%), Gaps = 0/419 (0%) Strand=Plus/Plus Query 18019 GCCGGCGCGGACGTCAAAGAGTGGTGCTTCGCCATCGAGGACAGTCTGTCGTCGCACGGC 18078 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct 392 GCCGGCGCGGACGTCAAAGAGTGGTGCCTCGCCATCGAGGACAGCATGTCGTCGCACGGC 451 Query 18079 TGCGCGCACGAGTACGACTGCTGCGGCTGCGCGTCGCGCTACGCCCGCGTGACGCCCTAT 18138 ||| |||||||||||||||||||||||||||| |||| |||||| || ||| || || Sbjct 452 TGCTCGCACGAGTACGACTGCTGCGGCTGCGCCTCGCACTACGCGCGGGTGTATCCGTAC 511 Query 18139 CGCGGCCGCGTGGTGCGGATCAGCGTCGGCGTGTCCTACAACTACTGACCAACGCAACAC 18198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 512 CGCGGCCGCGTGGTGCGGATCAGCGTCGGCGTGTCCTACAACTACTGACCAACGCAACGC 571 Query 18199 GAAGGGGAACGACGATGGCACGAATCAAGGCTGACGAGGTTTGCGTGGGCGACAAGATCG 18258 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 572 CAAGGGGAACGACGATGGCACGAATCAAGGCTGACGAGGTTTGCGTGGGCGACAAGATCG 631 Query 18259 TCCGCCCCGGCGATGCGATTTACGAAGTCGTGGCGCTCGAATGGTTCACGGTCACGGTAC 18318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 632 TCCGCCCCGGCGATGCGATTTACGAAGTCGTGGCGCTCGAATGGTTCACGGTCACGGTGC 691 Query 18319 ATCTGCATTGCGTCGAGCGCCGCGTGGCCAAGCTCGACCGACACGAGGCGTTTTCGTACA 18378 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 692 ATCTGCATTGCGTCGAGCGCCGCGTGGCCAAGCTCGACCGACACGAGACGTTCTCGTACA 751 Query 18379 ACCGCGACGAAAAGGTCGAGGTTGCCTGACAACCGCTCCCGCTACAGGAGAAAGACGTG 18437 ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| || Sbjct 752 ACCGCGACGAAAAGGTCGAGGTTGCCTAACAACCGCTCCCGCTACAGGAGAACGACATG 810 Score = 172 bits (190), Expect = 2e-38 Identities = 119/135 (88%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 17823 AGGAGAGATCATGGAAACGTTGCATGTCGAGCGCCGCGTCACGCGCAAGTTTGTGGGCAC 17882 |||||| | ||||| ||||||||||| | ||| || || |||||||||||||| ||||| Sbjct 240 AGGAGAAACAATGGATACGTTGCATGTTGCGCGTCGTGTTACGCGCAAGTTTGTCGGCAC 299 Query 17883 CTTCCGCCACCTGGACGCATGGGAAGGTCTGGGCACGATCCGGCACACGCCGTTCCGCAA 17942 ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||| Sbjct 300 GTTCCGCCACCTGGACGCATGGGACGAGCTGGGCACGATCCGGCACACGCCATTCCGCAA 359 Query 17943 GGTGTACGACCCGGC 17957 ||||||| ||||||| Sbjct 360 GGTGTACAACCCGGC 374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200545380586440