Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq6899 2051 0.0 seq5743 241 3e-59 seq5744 217 4e-52 seq6609 156 1e-33 seq7071 91.5 4e-14 >seq6899 Length=2347 Score = 2051 bits (2274), Expect = 0.0 Identities = 1189/1238 (96%), Gaps = 23/1238 (2%) Strand=Plus/Plus Query 8973 TAAGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCGTTGTA 9032 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 633 TAGGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCGTTGTA 692 Query 9033 GAAAGAAGCTCACGGAACGGACCCACGACGATGCAGCGGCAGATCGGTTTTGCGGAAGCG 9092 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 693 GAAAGAAGCTCACGGAACGGACCCACGACGATGCAGCGGCAGATCGGTTTTGCGGAAGCG 752 Query 9093 GAAAGTGCGGGCAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGGAGAAG 9152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 753 GAAAGTGCGGGCAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGGAGAAG 812 Query 9153 GTCGTCCCTTGGTCGCGGCTGCTGTCGGTGATCGGGCCGTATTACCCGAAGGGCGAGCGT 9212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 813 GTCGTCCCTTGGTCGCGGCTGCTGTCGGTGATCGGGCCGTATTACCCGAAGGGCGAGCGT 872 Query 9213 GGCCGGCCGCCGATTGGCCTGGAACGGA-----------------------TGCTGCGGA 9249 ||| ||||||||| Sbjct 873 GGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTGCGGA 932 Query 9250 TCTACTTGCTGCAGCAGTGGTACGGGTTGTCGGACGAAGGGCTTGAAGATGCGCTCTACG 9309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 933 TCTACTTGCTGCAGCAGTGGTACGGGTTGTCGGACGAAGGGCTTGAAGATGCGCTCTACG 992 Query 9310 ACAGCATCGCGATGCGCGCCTTCGCGGGCATCGACCTGGCGCGCGAGAACGTGCCGGACG 9369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 993 ACAGCATCGCGATGCGCGCCTTCGCGGGCATCGACCTGGCGCGCGAGAACGTGCCGGACG 1052 Query 9370 CCACCACGCTGTTGAAATTCCGGCGCCTGCTGGTCGAGCACGCACTGACGCGAAAGCTGT 9429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1053 CCACCACGCTGTTGAAATTCCGGCGCCTGCTGGTCGAGCACGCACTGACGCGAAAGCTGT 1112 Query 9430 TCGACGAGATCGGCATCGAGTTGTGCGAGCGCGGGCTGATGATGAAGGAAGGCACGCTGG 9489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1113 TCGACGAGATCGGCATCGAGTTGTGCGAGCGCGGGCTGATGATGAAGGAAGGCACGCTGG 1172 Query 9490 TGGATGCGACGATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGAGCCGTGACC 9549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1173 TGGATGCGACGATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGAGCCGTGACC 1232 Query 9550 CGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCCATGTCG 9609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1233 CGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCCATGTCG 1292 Query 9610 GCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACGAGCCGG 9669 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1293 GCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACGAGCCGG 1352 Query 9670 ACGTATCGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCGATGCGG 9729 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1353 ACGTATCGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCGATGCGG 1412 Query 9730 GCTACACCGGCGTGGACAAGCGCGAGGAGATGAAGGGCAAGACGGTGAAGTGGCACGTGG 9789 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1413 GCTACACCGGCGTGGACAAGCGCGAGGAGATGAAGGGCAAGACGGTGAAGTGGCACGTGG 1472 Query 9790 CGCTCAAGCGCGGAAAGATCAGGGCGATGCAGGAAGGTCCGCTGAAGGACCTCGTGATCG 9849 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1473 CGCTCAAGCGCGGAAAGATCAGGGCGATGCAGGAAGGTCCGCTGAAGGACCTCGTGATCG 1532 Query 9850 CGGTCGAGCGAACCAAGGCGCAGATCCGCGCCCGGGTCGAGCATCCGTTTCATGTCGTGA 9909 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1533 CGGTCGAGCGAACCAAGGCGCAGATCCGCGCCCGGGTCGAGCATCCGTTTCATGTCGTGA 1592 Query 9910 AGAACCTGTTTCGTCATCGCAAGGTGCGCTACAAGGGTCTAGCCAGGAACACGGCACAGC 9969 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1593 AGAACCTGTTTCGTCATCGCAAGGTGCGCTACAAGGGTCTAGCCAGGAACACGGCACAGC 1652 Query 9970 TGTTCAGTCTGTTCGCGCTGGCGAACCTGGTGATCGCGAAAAATCAGCTGTTGTCGACTC 10029 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1653 TGTTCAGTCTGTTCGCGCTGGCGAACCTGGTGATCGCGAAAAATCAGCTGTTGTCGACTC 1712 Query 10030 ATGGGAGCAATCCGTCATGTGTGTGAAAAACGCGGGAAGTGAGGCCCGAATACGAGCGAA 10089 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1713 ATGGGAGCAATCCGTCATGTGTGTGAAAAACGCGGGAAGTGAGGCCCGAATACGAGCGAA 1772 Query 10090 ACTCACCTCGCATGTCGTCAAATTCCTACGTCAATCTGAAAATTGCAACCTGCCTCGTCC 10149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1773 ACTCACCTCGCATGTCGTCAAATTCCTACGTCAATCTGAAAATTGCAACCTGCCTCGTCC 1832 Query 10150 GTTATGCGGACGACAGGCTCATTGATCAGCGTTTCCCT 10187 |||||||||||||||||||||||||||||||||||||| Sbjct 1833 GTTATGCGGACGACAGGCTCATTGATCAGCGTTTCCCT 1870 Score = 87.8 bits (96), Expect = 4e-13 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 8968 GTTCCTAAGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAG 9023 || ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 407 GTACCTCGGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAG 462 >seq5743 Length=241 Score = 241 bits (266), Expect = 3e-59 Identities = 198/241 (82%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 24201 CCTCGAAGGTGGTTCGAGGTGCCTTGAGCTCTACTTCTGCCGGAGATACCGTGACAGCGC 24260 ||||||| ||||||||||| ||||||||||| || ||||| || || ||| ||||||| | Sbjct 241 CCTCGAATGTGGTTCGAGGGGCCTTGAGCTCAACCTCTGCAGGCGAAACCCTGACAGCCC 182 Query 24261 GGCCTGGGGAATATGAAGAGACGACATCGTTCAGCTGAGCGGTCATTTCCTCAAGCTGCG 24320 | || || || || || |||||||| ||||| ||||| || || || | |||||||||| Sbjct 181 GACCGGGTGAGTAAGATGAGACGACTTCGTTGAGCTGCGCCGTTATGGCGTCAAGCTGCG 122 Query 24321 CTTTGAACTTCTCCGCATAGACACTCTGCTGCTTCGCGCGTGATTCCTCGACAATCTTTG 24380 ||||||| |||||| | || | | |||||||||| |||||||| |||||||| ||||| | Sbjct 121 CTTTGAATTTCTCCTCGTAAATATTCTGCTGCTTTGCGCGTGACTCCTCGACGATCTTCG 62 Query 24381 CAATTTCTTCATCCGCAGCAGCACGATCCACGGAACGCTCAAGGATCCGACCGATGATGC 24440 |||| || ||||| || ||||| ||||| || ||||||||||| || ||||| ||||||| Sbjct 61 CAATCTCCTCATCAGCCGCAGCGCGATCGACTGAACGCTCAAGAATTCGACCAATGATGC 2 Query 24441 T 24441 | Sbjct 1 T 1 >seq5744 Length=213 Score = 217 bits (240), Expect = 4e-52 Identities = 176/213 (83%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24014 GCAAACGTCTGCGCTTGGATCGGGTGCTGAAAAAGCTCTGGTTCCTCGATCGCGAGGCAG 24073 || |||||||| ||||| || ||||||||||| || ||||| || |||||||| |||||| Sbjct 1 GCGAACGTCTGAGCTTGAATAGGGTGCTGAAATAGTTCTGGCTCTTCGATCGCCAGGCAG 60 Query 24074 ATCACCCCCTCTGCCGATGCAGCTCCCGACTGCGCCAAGAGCTGGAGAGCCGAAATTAGA 24133 || || || |||| ||| || || |||||||||||||| ||||| || || ||||| | | Sbjct 61 ATGACACCTTCTGTCGACGCTGCCCCCGACTGCGCCAAAAGCTGAAGCGCGGAAATCAAA 120 Query 24134 AGCGTGCGCTGGAACCCGTGCCCCTGTCGCTCCACTGCCGTCTCGGTTGTGCCATCGAGC 24193 ||||||||||| || || |||||||| ||||| || || ||||||||||| || ||| | Sbjct 121 AGCGTGCGCTGAAAACCATGCCCCTGCCGCTCTACCGCAGTCTCGGTTGTACCGTCGCGT 180 Query 24194 ACTGCCACCTCGAAGGTGGTTCGAGGTGCCTTG 24226 | ||||||||||| ||||||||||| |||||| Sbjct 181 ATCGCCACCTCGAATGTGGTTCGAGGGGCCTTG 213 >seq6609 Length=178 Score = 156 bits (172), Expect = 1e-33 Identities = 140/176 (80%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 24830 TTGCCAAGCTCAGCTCGGTCCTTTTCCGTGAGGTCGTCGAATGTGACCTGAACTTCGATG 24889 ||||||||||| |||| | ||| || || ||||| ||||||| |||||||| |||| | Sbjct 2 TTGCCAAGCTCGTCTCGATACTTGTCGGTAAGGTCAGCGAATGTAACCTGAACCTCGACG 61 Query 24890 TCTTCGTCGGACGCGCCGAAGGAACAGTCCCTCTCGGTGAGCAAACCCGGCCGCCCGTTA 24949 |||||||||| ||| ||||| ||||||||| |||| || || |||| || |||||| Sbjct 62 TCTTCGTCGGTCGCCCCGAAAGAACAGTCCTTCTCCGTTAGTGAACCGGGTTTGCCGTTA 121 Query 24950 AAAAACCAGTCGAGTGCGCGGAGCACCGTGGATTTGCCGGTGCCGTTTGGCCCAAT 25005 || |||||||||| || || ||||| ||||| ||||||| ||||| ||||| || Sbjct 122 AAGTACCAGTCGAGGGCACGAAGCACAGTGGACTTGCCGGCCCCGTTGGGCCCGAT 177 >seq7071 Length=169 Score = 91.5 bits (100), Expect = 4e-14 Identities = 52/53 (98%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 8973 TAAGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGG 9025 || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 117 TAGGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGG 169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119023295410040