Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04-
25] 7,290 sequences; 12,699,436 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq2088 111 1e-19
seq1857 82.4 5e-11
>seq2088
Length=263
Score = 111 bits (122), Expect = 1e-19
Identities = 116/151 (77%), Gaps = 1/151 (1%)
Strand=Plus/Plus
Query 34744 ATCATTT-CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTAT 34802
|||| || || ||||||||||||| ||| ||||||| ||| |||||| ||||| || |
Sbjct 59 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 118
Query 34803 AGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGT 34862
||||||| || | | |||| || |||||||| ||||| || |||| || ||||||||
Sbjct 119 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 178
Query 34863 CTTGCGGCACCCCCTCCTTGTCGTTTATTTT 34893
|| | || | || |||||||| | |||||
Sbjct 179 CTGGAGGAATACCTTCCTTGTCTTGAATTTT 209
>seq1857
Length=10065
Score = 82.4 bits (90), Expect = 5e-11
Identities = 159/235 (68%), Gaps = 10/235 (4%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || || | ||| || || || || | |||| ||||||||||||||| || || ||
Sbjct 9698 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 9639
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | | | || || || ||||| ||||| ||||||| || ||| || ||| | ||
Sbjct 9638 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 9579
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCT 34925
| || |||||||| | ||||| || ||| |||| ||||| || |
Sbjct 9578 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGAT-----T 9524
Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
| || || | |||||||| || || || | ||||| || || |||||||| ||
Sbjct 9523 CAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 9469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325663863212510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |