Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1339 107 2e-18 >seq1339 Length=16980 Score = 107 bits (118), Expect = 2e-18 Identities = 208/302 (69%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 171666 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTT-ATGCGGGTTTA 171724 ||||||||| ||||| | | |||||| |||||||||| ||||||| ||| ||||| | Sbjct 12074 AGGTGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATAAGATG-GGGTTCA 12132 Query 171725 CTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGG 171784 || || |||| ||| ||| | || || ||||||||||||||||||| ||| || | Sbjct 12133 AAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTG 12192 Query 171785 CTCAATATATCGAC-TGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAA 171843 || |||| | ||| || || || || || |||||||| | || ||||| | || Sbjct 12193 CTAAATACA-AGACGTGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAG 12251 Query 171844 ACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAAT 171903 |||| ||| || | | || || | |||||| || | || | ||||| Sbjct 12252 GTTATTCATAAACTAAAGACAAATCCCTACGATAGAAGAATCATTATGAGTGCCTGGAAC 12311 Query 171904 GTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCACACTTTAGCACAATTTTATGTC 171963 | || | |||| ||||||| | | || || ||||| | ||| |||| || |||||| Sbjct 12312 CCAGCTGATTTTGACAAAATGGCTTTGCCACCATGCCATATTTTTTCACAGTTCTATGTC 12371 Query 171964 AG 171965 || Sbjct 12372 AG 12373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628473925094400