Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04-
25] 7,290 sequences; 12,699,436 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq2088 145 9e-30
seq1299 136 5e-27
seq1058 129 7e-25
seq2857 125 8e-24
seq1857 123 3e-23
seq1335 118 1e-21
seq212 111 2e-19
seq1389 102 9e-17
>seq2088
Length=263
Score = 145 bits (160), Expect = 9e-30
Identities = 142/183 (78%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 27436 AAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATT 27495
|||||||| || || |||||||| || ||| | |||| || | ||| | ||||||
Sbjct 263 AAGACTATAACCCTAGAGGTTGAATCTTCTGACACTATTGACAACGTTAAGTCGAAAATT 204
Query 27496 CAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTC 27555
|| |||||||| || ||||||||||||||||| | | |||||||| |||||||||||
Sbjct 203 CAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATTTTTGCCGGTAAGCAACTA 144
Query 27556 GAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615
|| |||| | | || || | ||||| ||| | |||||||| ||||||||||| || |||
Sbjct 143 GAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAAGGAGTCCACTCTTCACCTTGTC 84
Query 27616 TTG 27618
|||
Sbjct 83 TTG 81
>seq1299
Length=15568
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | ||||| ||||||||||| || || ||||| || |
Sbjct 7056 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 6997
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| | || || || |||||||| || ||||| || |||||
Sbjct 6996 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 6937
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || |||| | | || | | ||||| ||
Sbjct 6936 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 6877
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| ||||| || | ||||||
Sbjct 6876 ATCCAAAAGGAATCTACTCTACACTTGGTCTTG 6844
>seq1058
Length=5671
Score = 129 bits (142), Expect = 7e-25
Identities = 320/476 (67%), Gaps = 21/476 (4%)
Strand=Plus/Minus
Query 81223 TCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCG 81281
|| ||| |||||||||| ||||| ||||| || || | ||||| || | ||| ||
Sbjct 1900 TCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCA-CG 1842
Query 81282 CGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCA 81341
||||| | ||| ||||| | | || | ||| || | || || ||||||||
Sbjct 1841 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCA 1782
Query 81342 TGGCTCCAGATACACGGCGATCGACCC----CTTGCGACGGCCACCCTGGTTGACGTAAC 81397
||| ||||| || | ||| | || || ||| | |||||||||| || ||||
Sbjct 1781 TGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTT-ATTACCACCCTGGTCAACATAAC 1723
Query 81398 GGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTAC 81457
||||||| || || ||||| | |||||| || | ||| | || |||||| ||||
Sbjct 1722 GGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTAC 1663
Query 81458 CCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACC 81517
| | || || || | | || | || ||| ||||| || ||||| | |
Sbjct 1662 CAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAG--C 1605
Query 81518 ACTTT--GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTT 81575
| ||| |||||| |||||| |||| ||| || ||||| |||||||| || |
Sbjct 1604 AGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTC 1545
Query 81576 TTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAAC 81633
|||||| ||| ||||||||| ||||| ||||| |||| ||| ||||||||||||
Sbjct 1544 CTTCATGGCAACCAAGAAACAAGAGGACATTTGAGG--TTTTGGAGTACCGGCATTGAAC 1487
Query 81634 AGTGTTGGGGTCGCGTGAATGAAATAACGGTTT---GACATCAGGTCATAGGTTTC 81686
| ||||| | |||||| | ||||| ||| ||||||| || ||| |||||
Sbjct 1486 AACGTTGGAGAGGCGTGAGTAAAATA---TTTTAGAGACATCAAGTTATACGTTTC 1434
>seq2857
Length=14165
Score = 125 bits (138), Expect = 8e-24
Identities = 338/512 (66%), Gaps = 15/512 (3%)
Strand=Plus/Minus
Query 81232 TTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTC 81290
||||||||| ||||||||||| || || | ||||| || | ||| || || ||
Sbjct 6262 TTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCA-CGAATTTCTTC 6204
Query 81291 ATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAG 81350
| ||| || | | | |||| |||||| | ||| || ||||||||||||||||
Sbjct 6203 CTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCTGCATGCCATGGCTCCAA 6144
Query 81351 ATACACGGCGATCGACCC------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGT 81404
| | ||||| | || |||| || ||||||||| || |||||||||||
Sbjct 6143 GAAAAGGGCGAAAGCACCAGGTCTCTTGTTAC---CACCCTGGTCCACATAACGGGCAGT 6087
Query 81405 CGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGAT 81464
|| || ||||| | |||||| || | || | ||| |||||| ||||| ||||
Sbjct 6086 ATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAGCGAT 6027
Query 81465 ACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTT-- 81522
| || || ||| || | ||| |||| |||||| | ||||||| || |||
Sbjct 6026 ATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTG--CAGTTTTG 5969
Query 81523 GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATG 81582
|||||| |||||| |||| || |||||||| || ||||| || | ||||||
Sbjct 5968 GAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCTTCATG 5909
Query 81583 TCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGG 81642
||| |||||||| ||||| ||||| | | || || ||||| | ||||||
Sbjct 5908 GCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGG 5849
Query 81643 GTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATA 81702
| |||||| |||| || | ||||||| | ||| || | | || | |||
Sbjct 5848 GAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATTCGATA 5789
Query 81703 TCGTCACCGTGAATACCGATAGCTACACGCAT 81734
||| ||| || ||||| | || ||||||||
Sbjct 5788 TCGCTACCATGGATACCTAGCGCCACACGCAT 5757
>seq1857
Length=10065
Score = 123 bits (136), Expect = 3e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| | ||||| || || || ||| | |||||||| ||
Sbjct 9700 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 9759
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct 9760 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 9819
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || ||||| |||||||| || || || | | | ||| | | ||||| ||
Sbjct 9820 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 9879
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
||||||||||||| ||||||||
Sbjct 9880 ATCCAAAAGGAATCTACTCTTCA 9902
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||||||||| || || || |||||||| || || |||||||| || |
Sbjct 9928 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 9987
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | |||||||| |||||||| || ||||||||||| ||
Sbjct 9988 GACACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 10047
Query 27526 CAGCGTCTAATTTTTGC 27542
|| | | ||||||||
Sbjct 10048 CAAAGATTGATTTTTGC 10064
>seq1335
Length=21199
Score = 118 bits (130), Expect = 1e-21
Identities = 160/223 (72%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 27396 TATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGT 27455
|||| | || || | | ||| || ||||| | || || ||||| || ||| | || ||
Sbjct 17100 TATTTCAATTTTGTACAGCTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGT 17159
Query 27456 TGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCC 27515
||| || ||| | ||||| ||| | ||| | || || || |||||||| || || ||
Sbjct 17160 TGAATCTTCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCC 17219
Query 27516 TCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGC 27575
|| ||||| || | | || ||||||||||||||| | || || | | | || ||| |
Sbjct 17220 ACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATC 17279
Query 27576 AGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||| || ||||||||||||||||| | ||| | ||||||
Sbjct 17280 TGACTACAACATCCAAAAGGAATCCACTTTACATTTGGTCTTG 17322
>seq212
Length=9500
Score = 111 bits (122), Expect = 2e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
||||||||||| | || || ||||| || ||| | || ||||| || ||| | |||
Sbjct 8974 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 9033
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || ||||| |||||||| || || || || ||||| || | |
Sbjct 9034 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 9093
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || || | | | ||| | | ||||| || | |||||
Sbjct 9094 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 9153
Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618
||||||||| | || ||||||||
Sbjct 9154 GAATCCACTTTGCACTTAGTCTTG 9177
>seq1389
Length=207
Score = 102 bits (112), Expect = 9e-17
Identities = 125/171 (73%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 27438 GACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCA 27497
|||||| || || |||||||| || || | |||| || | || ||| |||||
Sbjct 1 GACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAACGTCAAAAGTAAGATTCA 60
Query 27498 GGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGA 27557
|| || || || || ||||| || || ||| | | |||||||||||||||||||| ||
Sbjct 61 AGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAGCAACTAGA 120
Query 27558 GGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608
|||| | | ||| | | ||||| || ||||||||||||| ||||||||
Sbjct 121 AGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCA 171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570258430464800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |