Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04-
25] 8,158 sequences; 13,853,465 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq1005 118 9e-22
seq578 96.9 3e-15
seq731 84.2 2e-11
seq76 82.4 6e-11
>seq1005
Length=22682
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| |||||||| ||| |||| || || || || || || |||||| ||| ||| |
Sbjct 14225 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 14166
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || || | | | || ||||| || || || || |||||| | || ||
Sbjct 14165 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 14106
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
||||||||| | |||||||| || || |||||||||||| | |||| || |||| |||
Sbjct 14105 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 14046
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || ||||||||||||||||| ||| |||| || |||| |||| ||
Sbjct 14045 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 13996
>seq578
Length=448
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| ||||||| | || || || || || ||| || ||| | |
Sbjct 222 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 163
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | |||| || ||| |||||||||||| | || ||||||
Sbjct 162 GACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 103
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|| ||| | || ||||| || || ||| | |||||| | ||| || | || |||||
Sbjct 102 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 43
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATT 25252
|| ||||||||||||||||||||| ||||||| ||||
Sbjct 42 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATT 5
>seq731
Length=28746
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 25048 TCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCG 25107
|||| || ||||| || || ||||| || ||| ||| | | || || | | |
Sbjct 11233 TCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACA 11174
Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167
|| ||||| ||| ||| || || |||||| | || || ||||||||| | ||||
Sbjct 11173 ATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 11114
Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227
|||| || || ||||||||||| | ||| || | || ||||| |||||||| ||||
Sbjct 11113 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAAT 11054
Query 25228 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
| ||| | ||| | || || |||| |||| ||
Sbjct 11053 CCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 11020
>seq76
Length=21991
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || || | || || ||||| || |||||||| || || ||| || |
Sbjct 222 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 163
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| ||| | | | | ||| ||||| || || |||||| | || |||||||
Sbjct 162 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 103
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|| || | |||||||| || || || | ||||| | ||| || | || |||||
Sbjct 102 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 43
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATT 25252
|| ||||||||||||||||||||| ||||||| ||||
Sbjct 42 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATT 5
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410755956271412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |