Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04- 25] 8,158 sequences; 13,853,465 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq578 131 1e-25 seq76 104 2e-17 seq1005 102 7e-17 seq731 100 2e-16 >seq578 Length=448 Score = 131 bits (144), Expect = 1e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| |||| || || | || ||| | || || || | | Sbjct 222 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 163 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| |||||| || |||||||| || ||||| |||||| Sbjct 162 GACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 103 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||||| | || |||||||| ||||||| |||| | | || || ||| Sbjct 102 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 43 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGA 24212 || ||||| |||||||| |||| || ||||| ||||||||| Sbjct 42 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGA 1 Score = 118 bits (130), Expect = 9e-22 Identities = 161/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 23993 GCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGA 24052 |||| | ||||| || ||| | || || || | || ||| | || || || | || Sbjct 448 GCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGA 389 Query 24053 CACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACA 24112 ||| ||||| | || || || ||| ||||| ||||| || ||||| |||||||| Sbjct 388 CACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACA 329 Query 24113 GAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACAT 24172 ||| |||||| | ||| |||||||| ||||| | |||| | ||||||||||| Sbjct 328 AAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACAT 269 Query 24173 TCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| ||||| ||||| | ||||| ||||| ||||||||||| || Sbjct 268 TCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 224 >seq76 Length=21991 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || ||| | || || | || || || || | Sbjct 222 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 163 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || || || ||||| ||||| || ||||| |||||| Sbjct 162 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 103 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | | ||| ||||| || ||||| | |||| | | || || ||| Sbjct 102 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 43 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGA 24212 || ||||| |||||||| |||| || ||||| ||||||||| Sbjct 42 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGA 1 >seq1005 Length=22682 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || || || ||||| || || | |||||| | ||||| || | Sbjct 14226 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 14167 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||||| || || | ||||| ||||| ||||| ||||| || || || || Sbjct 14166 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 14107 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||| ||| |||| | | || |||||| | ||||||| |||| | ||| || Sbjct 14106 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 14047 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| |||||||| | || || || || ||||||||||| || Sbjct 14046 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 13996 >seq731 Length=28746 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 ||||| || || || ||||| || | || || | ||||| || | ||||| || Sbjct 11237 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 11178 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||||| ||||| ||||| || || || || ||||| ||| || Sbjct 11177 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 11118 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || |||||| | ||||| | |||| | | || || |||||||||||| Sbjct 11117 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 11058 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || | || ||||| || ||||||||||| || Sbjct 11057 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 11020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429893253344490