Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04- 25] 8,158 sequences; 13,853,465 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq1890 93.3 2e-14 >seq1890 Length=940 Score = 93.3 bits (102), Expect = 2e-14 Identities = 337/517 (65%), Gaps = 18/517 (3%) Strand=Plus/Minus Query 16663 CTGCAAGCGGATGCGTACGCCGGGTTCAACGAGCTGTATCGCAA-TGGTGGGATAACGGA 16721 |||||||| ||||| |||| ||| ||| ||||| |||| || || ||| ||| || Sbjct 934 CTGCAAGCCGATGCCTACGGCGGCTTCGACGAGTTGTA-CGTAAGTGGCAAGATCCGCGA 876 Query 16722 AGCTGCCTGCTGGGCTCATGCCCGCCGAAAGATCCACGATGTGCACGTCCGCATCCCGTC 16781 ||||| || |||| || || || ||||| | |||| | |||| ||| ||| | Sbjct 875 GGCTGCTTGTTGGGACCACGCGCGGAGAAAGTACTACGAGATCCACGCGAGCACACCGAC 816 Query 16782 AGCACTGACGGAAGAAGCCCTGGAGCAGATCGGTCAGTTGTACGCCATAGAGGCGGATAT 16841 | ||| | || || ||| |||||| |||| |||| ||| || | || || Sbjct 815 GGACGAGACCCAGAAACTGCTCGAGATGATCGGCGAGTTCTACGGCATTGAAACCGACAT 756 Query 16842 AAGGGGAATGCCGGCAGA------GCAGCGGCTTGCTGAACGTCAGCGAAAAACGAAACC 16895 | || | |||| | || |||||| | ||| | ||| || |||| || || Sbjct 755 CCGCGGCAAGCCGCCCGATGAACGGCAGCG-CGTGCGG--CGTGAG---AAAAGCAAGCC 702 Query 16896 GTTGTTGAAATCCCTGGAAAGCTGGTTGCGTGAAAAGATGAAGACCCTGTCGCGACACTC 16955 | || || | || | |||| | | || | ||| | ||| |||||||| | || Sbjct 701 GCTGCTGGACGCCTTCGAAACGAGAATCCGGGCCAAGCTCGCGACGCTGTCGCGCAAGTC 642 Query 16956 AGAGTTGGCGAAGGCGTTCGCGTACGCACTTAACCAGTGGCCGGCACTGACG-TACTATG 17014 ||| |||| ||| || |||| | || || || ||| | || |||||| | | || Sbjct 641 GGAGCTGGCCGGCGCGATCCAGTACTCGCTGAATCACTGGACTGCGCTGACGCTGTTCTG 582 Query 17015 CGAACGATGGCTGGGTGGAAATCGACAACAACATCGCTGAAAATGCCCTGCGGGCGGTCA 17074 ||| ||||| | || ||| |||| | || ||||| |||||||| || | Sbjct 581 CGAG-GATGGGCAAGCCGAGATCAGCAACGCGTTGGCAGAAAACGCCCTGCGTTGCGTGA 523 Query 17075 GTCTGGGTCGTAAAAACTTCCTGTTCTTCGGCTCTGATCATGGTGGTGAGCGGGGAG-CG 17133 | || || | || |||||||||||| || || || || |||||||||| | || Sbjct 522 GCCTCGGGAGAAAGAACTTCCTGTTCGCTGGTTCCGACAGCGGGGGTGAGCGGGCCGCCG 463 Query 17134 CTACTGTACAGCCTGATCGGGACGTGCAAACTGAATG 17170 | | |||||||| |||| || |||||||||| |||| Sbjct 462 CGA-TGTACAGCTTGATTGGTGCGTGCAAACTCAATG 427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198725839594504