Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04- 25] 8,158 sequences; 13,853,465 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1353 264 1e-65 >seq1353 Length=56646 Score = 264 bits (292), Expect = 1e-65 Identities = 890/1370 (65%), Gaps = 38/1370 (3%) Strand=Plus/Plus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || |||||||||| |||||| ||||| | ||||| || || |||||||||||| Sbjct 53900 GGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCC 53959 Query 106013 ATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAGTC 106071 || || || | || ||| | | | |||| | || ||| || ||||| || Sbjct 53960 ATGGTCAGGGAATTTCTAATACCATGCTTCATGATATCTTTTCTTAAGGTG-TCCCAATC 54018 Query 106072 GTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGG 106131 | || | || || |||||||||||||| || || | ||||| || | || Sbjct 54019 CCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGG 54078 Query 106132 AGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC--AGCCAATTCACAGCTCGCCTCC 106189 ||| || | || || || || | ||| | |||| ||| | |||||| || ||| Sbjct 54079 AGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGAGCTAGTTCACAAGAAGCTTCC 54136 Query 106190 AGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAA 106249 | ||| || ||||| || ||||||||||| | ||| | | |||||| || ||| Sbjct 54137 ATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAA 54196 Query 106250 TCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 106309 ||||||| | || ||| || || || ||||||||||||||||||||| |||| Sbjct 54197 TCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATT 54256 Query 106310 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATG 106369 ||||| |||| |||||| || |||| ||| ||||| || || |||| | |||||| Sbjct 54257 GGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATG 54316 Query 106370 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAA 106429 |||| ||||| ||| ||||||| || | |||||||| | ||||| | | | Sbjct 54317 ACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTAT 54376 Query 106430 GTGCGAGTCT---------------CTTCATTGACATACTTTGGAAGGGCGATTGATGCC 106474 ||| ||||| |||| ||| || | ||| | ||| | || ||| Sbjct 54377 GTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC--TGGTAAGGCAACGGAAGCC 54433 Query 106475 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTG 106534 || || |||||||| || ||||| | ||| ||| || | |||||| || ||||| Sbjct 54434 AAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTT 54493 Query 106535 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAG 106594 || ||| || || || || ||||| ||| ||| |||| || ||||||||||| Sbjct 54494 GATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAA 54553 Query 106595 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCG 106654 | | | | || || || || || || || | | | ||| | | ||| | || | Sbjct 54554 ACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATA-ATTTTTG 54612 Query 106655 GCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714 | | | || | || | || || || |||||| || || || || |||||| Sbjct 54613 G--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAAC 54670 Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCATTG 106773 || ||||| ||| | ||| || || ||| |||| |||| | | ||| Sbjct 54671 TCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT-TGGAGAGAATAATGTCCAGGT 54729 Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833 ||| || || || |||||||||||||| || |||||||| || | | || | ||| Sbjct 54730 CCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATC 54789 Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-CTCAAGGAACTCCATGATAT 106892 ||| ||| || || | ||| ||||| || ||| |||| || || | |||| Sbjct 54790 TCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAATATCAATAAAATCAAATATAT 54848 Query 106893 CCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGA 106948 | || |||||||| || || || | || | | || |||| | ||| | || Sbjct 54849 CAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTT-TATTACCACCCTGG 54907 Query 106949 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 107008 | ||||| || || ||| || || || |||| ||| ||||| | ||| | || | Sbjct 54908 TCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTA 54967 Query 107009 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATA 107068 || ||||| || ||| ||| | | | | | | |||||| || | |||||| Sbjct 54968 CCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATA 55027 Query 107069 CCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 107128 || ||||| || || || ||||| ||| | | || | || || || | ||| Sbjct 55028 CCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATA 55087 Query 107129 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 107188 ||||||||||| |||| | | ||| ||| |||||| || ||| |||| ||||| ||| Sbjct 55088 GAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCA 55147 Query 107189 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTCTC 107247 ||||| | ||||| | |||||| | || ||| || | |||||| || || || || Sbjct 55148 TTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAGAGACATCAAGTTATACGTTTC 55206 Query 107248 CAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 || ||| || || ||| ||||||||||| | || || | ||||| Sbjct 55207 TAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAA 55256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589920636707920