Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04- 25] 8,158 sequences; 13,853,465 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq5942 2185 0.0 seq6509 381 1e-101 seq2076 277 4e-70 seq3107 154 4e-33 >seq5942 Length=2828 Score = 2185 bits (2422), Expect = 0.0 Identities = 1214/1216 (99%), Gaps = 0/1216 (0%) Strand=Plus/Minus Query 8973 TAAGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCGTTGTA 9032 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1832 TAGGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCGTTGTA 1773 Query 9033 GAAAGAAGCTCACGGAACGGACCCACGACGATGCAGCGGCAGATCGGTTTTGCGGAAGCG 9092 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1772 GAAAGAAGCTCACGGAACGGACCCACGACGATGCAGCGGCAGATCGGTTTTGCGGAAGCG 1713 Query 9093 GAAAGTGCGGGCAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGGAGAAG 9152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1712 GAAAGTGCGGGCAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGGAGAAG 1653 Query 9153 GTCGTCCCTTGGTCGCGGCTGCTGTCGGTGATCGGGCCGTATTACCCGAAGGGCGAGCGT 9212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1652 GTCGTCCCTTGGTCGCGGCTGCTGTCGGTGATCGGGCCGTATTACCCGAAGGGCGAGCGT 1593 Query 9213 GGCCGGCCGCCGATTGGCCTGGAACGGATGCTGCGGATCTACTTGCTGCAGCAGTGGTAC 9272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1592 GGCCGGCCGCCGATTGGCCTGGAACGGATGCTGCGGATCTACTTGCTGCAGCAGTGGTAC 1533 Query 9273 GGGTTGTCGGACGAAGGGCTTGAAGATGCGCTCTACGACAGCATCGCGATGCGCGCCTTC 9332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1532 GGGTTGTCGGACGAAGGGCTTGAAGATGCGCTCTACGACAGCATCGCGATGCGCGCCTTC 1473 Query 9333 GCGGGCATCGACCTGGCGCGCGAGAACGTGCCGGACGCCACCACGCTGTTGAAATTCCGG 9392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1472 GCGGGCATCGACCTGGCGCGCGAGAACGTGCCGGACGCCACCACGCTGTTGAAATTCCGG 1413 Query 9393 CGCCTGCTGGTCGAGCACGCACTGACGCGAAAGCTGTTCGACGAGATCGGCATCGAGTTG 9452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1412 CGCCTGCTGGTCGAGCACGCACTGACGCGAAAGCTGTTCGACGAGATCGGCATCGAGTTG 1353 Query 9453 TGCGAGCGCGGGCTGATGATGAAGGAAGGCACGCTGGTGGATGCGACGATCTTCGAGGCT 9512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1352 TGCGAGCGCGGGCTGATGATGAAGGAAGGCACGCTGGTGGATGCGACGATCTTCGAGGCT 1293 Query 9513 GCGCCGTCCACGAAGAACGCCGGGAAGAGCCGTGACCCGGAGATGCATCAGACGAAGAAG 9572 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1292 GCGCCGTCCACGAAGAACGCCGGGAAGAGCCGTGACCCGGAGATGCATCAGACGAAGAAG 1233 Query 9573 GGCAACGACTGGTATTTCGGCATGAAGGCCCATGTCGGCGTCGACGCCGACTCGGGTCTG 9632 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1232 GGCAACGACTGGTATTTCGGCATGAAGGCCCATGTCGGCGTCGACGCCGACTCGGGTCTG 1173 Query 9633 GTGCATAGCGTGGTCACCACGGCGGCCAACGAGCCGGACGTATCGCAGGCCCACGCCCTG 9692 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1172 GTGCATAGCGTGGTCACCACGGCGGCCAACGAGCCGGACGTATCGCAGGCCCACGCCCTG 1113 Query 9693 CTGCACGGTCATGAGCAGGAAGCGTTTGGCGATGCGGGCTACACCGGCGTGGACAAGCGC 9752 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1112 CTGCACGGTCATGAGCAGGAAGCGTTTGGCGATGCGGGCTACACCGGCGTGGACAAGCGC 1053 Query 9753 GAGGAGATGAAGGGCAAGACGGTGAAGTGGCACGTGGCGCTCAAGCGCGGAAAGATCAGG 9812 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1052 GAGGAGATGAAGGGCAAGACGGTGAAGTGGCACGTGGCGCTCAAGCGCGGAAAGATCAGG 993 Query 9813 GCGATGCAGGAAGGTCCGCTGAAGGACCTCGTGATCGCGGTCGAGCGAACCAAGGCGCAG 9872 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 992 GCGATGCAGGAAGGTCCGCTGAAGGACCTCGTGATCGCGGTCGAGCGAACCAAGGCGCAG 933 Query 9873 ATCCGCGCCCGGGTCGAGCATCCGTTTCATGTCGTGAAGAACCTGTTTCGTCATCGCAAG 9932 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 932 ATCCGCGCCCGGGTCGAGCATCCGTTTCATGTCGTGAAGAACCTGTTTCGTCATCGCAAG 873 Query 9933 GTGCGCTACAAGGGTCTAGCCAGGAACACGGCACAGCTGTTCAGTCTGTTCGCGCTGGCG 9992 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 872 GTGCGCTACAAGGGTCTAGCCAGGAACACGGCACAGCTGTTCAGTCTGTTCGCGCTGGCG 813 Query 9993 AACCTGGTGATCGCGAAAAATCAGCTGTTGTCGACTCATGGGAGCAATCCGTCATGTGTG 10052 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 812 AACCTGGTGATCGCGAAAAATCAGCTGTTGTCGACTCATGGGAGCAATCCGTCATGTGTG 753 Query 10053 TGAAAAACGCGGGAAGTGAGGCCCGAATACGAGCGAAACTCACCTCGCATGTCGTCAAAT 10112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 752 TGAAAAACGCGGGAAGTGAGGCCCGAATACGAGCGAAACTCACCTCGCATGTCGTCAAAT 693 Query 10113 TCCTACGTCAATCTGAAAATTGCAACCTGCCTCGTCCGTTATGCGGACGACAGGCTCATT 10172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 692 TCCTACGTCAATCTGAAAATTGCAACCTGCCTCGTCCGTTATGCGGACGACAGGCTCATT 633 Query 10173 GATCAGCGTTTCCCTA 10188 ||||||||||||| || Sbjct 632 GATCAGCGTTTCCTTA 617 >seq6509 Length=391 Score = 381 bits (422), Expect = 1e-101 Identities = 319/391 (82%), Gaps = 0/391 (0%) Strand=Plus/Minus Query 24225 TGAGCTCTACTTCTGCCGGAGATACCGTGACAGCGCGGCCTGGGGAATATGAAGAGACGA 24284 ||||||| || ||||| || || ||| ||||||| || || || || || || ||||||| Sbjct 391 TGAGCTCAACCTCTGCAGGCGAAACCCTGACAGCCCGACCGGGTGAGTAAGATGAGACGA 332 Query 24285 CATCGTTCAGCTGAGCGGTCATTTCCTCAAGCTGCGCTTTGAACTTCTCCGCATAGACAC 24344 | ||||| ||||| || || || | ||||||||||||||||| |||||| | || | | Sbjct 331 CTTCGTTGAGCTGCGCCGTTATGGCGTCAAGCTGCGCTTTGAATTTCTCCTCGTAAATAT 272 Query 24345 TCTGCTGCTTCGCGCGTGATTCCTCGACAATCTTTGCAATTTCTTCATCCGCAGCAGCAC 24404 |||||||||| |||||||| |||||||| ||||| ||||| || ||||| || ||||| | Sbjct 271 TCTGCTGCTTTGCGCGTGACTCCTCGACGATCTTCGCAATCTCCTCATCAGCCGCAGCGC 212 Query 24405 GATCCACGGAACGCTCAAGGATCCGACCGATGATGCTCGATTTCCCGTCGAGCGATTCTT 24464 |||| || ||||||||||| || ||||| |||||||||||||| ||||||| ||| || | Sbjct 211 GATCGACTGAACGCTCAAGAATTCGACCAATGATGCTCGATTTTCCGTCGATCGACTCCT 152 Query 24465 CGCTCGCCCGAAGGTCGGCAGTGACCAAGACGAAGTCAAAAAGACCGCTCATCTTGCCGC 24524 |||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| | Sbjct 151 CGCTCGCCCGAAGGTCTGCAGTGACCAAGACGAAGTCAAAAAGTCCACTCATCTTGCCCC 92 Query 24525 CACTGTTGAAGCCGAAGAAATTGGTTTGCAGAGATTCGGGGGCGTCGATAAGTTGATCGG 24584 | || ||||||||||| || ||||| |||| ||| || || || ||| | ||||| || | Sbjct 91 CGCTATTGAAGCCGAAAAAGTTGGTCTGCAAAGACTCCGGAGCTTCGGTCAGTTGCTCAG 32 Query 24585 TGTGATTGGCCTCCCACGTCGTCATGGCTTG 24615 | || |||||||| | |||||| |||| Sbjct 31 TATGGCCAGCCTCCCAAGCCGTCATAACTTG 1 >seq2076 Length=326 Score = 277 bits (306), Expect = 4e-70 Identities = 252/315 (80%), Gaps = 2/315 (1%) Strand=Plus/Minus Query 24773 CCATCTTTGCTTCGGCGCTTCCATGCGGTGAACGTCGTAGTGCCCT-CGGGGGCATATTT 24831 || ||| ||| ||||||||||| |||||||| ||| | | |||| | || ||||| || Sbjct 325 CCGTCTGGGCTGCGGCGCTTCCACGCGGTGAAGGTCAT-GACCCCTGCAGGAGCATACTT 267 Query 24832 GCCAAGCTCAGCTCGGTCCTTTTCCGTGAGGTCGTCGAATGTGACCTGAACTTCGATGTC 24891 ||||||||| |||| ||||| || || ||||| ||||||| |||||||| |||| ||| Sbjct 266 GCCAAGCTCGTCTCGATCCTTGTCGGTAAGGTCAGCGAATGTAACCTGAACCTCGACGTC 207 Query 24892 TTCGTCGGACGCGCCGAAGGAACAGTCCCTCTCGGTGAGCAAACCCGGCCGCCCGTTAAA 24951 |||||||| ||| ||||| ||||||||| |||| || || |||| || |||||||| Sbjct 206 TTCGTCGGTCGCCCCGAAAGAACAGTCCTTCTCCGTTAGTGAACCGGGTTTGCCGTTAAA 147 Query 24952 AAACCAGTCGAGTGCGCGGAGCACCGTGGATTTGCCGGTGCCGTTTGGCCCAATCAGCGT 25011 |||||||||| || || ||||| ||||| ||||||| ||||| ||||| || | ||| Sbjct 146 GTACCAGTCGAGGGCACGAAGCACAGTGGACTTGCCGGCCCCGTTGGGCCCGATGAACGT 87 Query 25012 CGTGACGGAATCAAAAGGAATCGCCACGTCTTTCAGTGTGCGGAAGTTCTTGATGCGAAC 25071 ||| | |||||| || ||||||||||||||||||| |||||||| || || || ||||| Sbjct 86 CGTAATGGAATCGAAGGGAATCGCCACGTCTTTCAACGTGCGGAAATTTTTTATTCGAAC 27 Query 25072 GGATTGGATTTTCAT 25086 |||||| || ||||| Sbjct 26 GGATTGTATCTTCAT 12 >seq3107 Length=367 Score = 154 bits (170), Expect = 4e-33 Identities = 214/300 (71%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 23689 ATCTCCTATGCCGTAGAAAACGGCCGCCTCGGTATCTCCTTCGACGAGTAGCACGCGTGT 23748 ||| || || || ||||| || | || ||| || || || ||||| | |||| Sbjct 68 ATCGCCAATACCATAGAACACTGACGACTCTGTCGTACCCTCCACGAGAAAGGCGCGATG 127 Query 23749 TGCGAACAACGCGATTGAAAGACGACTTGTAACGACGCCGTCGAGTTGGCGGGCGACTTG 23808 ||||| | || | | ||| || ||| |||| |||||| | ||||| | ||| Sbjct 128 CGCGAAGAGTGCCACAGTAAGCTGATTTGCCACGATGCCGTCCAACTGGCGCTCAACTGT 187 Query 23809 GTCGGCATCAACCGTTCCTTTGAGTTTCGTCTTCACGTCGTCGACCGTGGCGCGATGCAC 23868 |||||| |||| || || ||||| | ||||||||| | ||||| ||| | || || Sbjct 188 GTCGGCGCTAACCACACCGTTAAGTTTGGCCTTCACGTCAGCAACCGTCGCGAGGTGGAC 247 Query 23869 GGTGACGGCGGGGATTTCGTCAGACGATCGCGTGAGCCGGCGTATCTGATGGAAATGGCG 23928 || ||| | || || |||||||| |||| ||| |||| || | ||||| |||||| || Sbjct 248 AGTTACGACAGGAATCTCGTCAGATGATCTCGTCAGCCTCCGGACCTGATCGAAATGTCG 307 Query 23929 TGCTTCAAGAAAGTACGGGCTATGAGTGGCATACGTGACCTGAATGCGCTTACTGGCGTC 23988 || ||||| ||||| ||||||||||| ||||| | |||||||||||||||| || ||| Sbjct 308 GGCCTCAAGGAAGTAAGGGCTATGAGTAGCATAAGCTACCTGAATGCGCTTACCGGTGTC 367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119022068471208