Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04- 25] 8,158 sequences; 13,853,465 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1353 322 6e-83 >seq1353 Length=56646 Score = 322 bits (356), Expect = 6e-83 Identities = 913/1387 (66%), Gaps = 38/1387 (3%) Strand=Plus/Minus Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286 ||| | |||||| | ||||||||||| ||| || || ||| || || || || || Sbjct 55254 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 55195 Query 75287 AAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345 |||||| | || ||| || | |||||| | ||||| | |||||||| ||||| || Sbjct 55194 TTGATGTCTCTAAAATATTTT-ACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 55136 Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405 || ||| || |||||| ||| ||| | | |||| ||||||||||| ||| | || || Sbjct 55135 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 55076 Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465 || | || | | ||| ||||| || || || ||||| |||||||| | || Sbjct 55075 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 55016 Query 75466 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 75525 |||||| | | | | | | ||| ||| || ||||| ||| || | || Sbjct 55015 TATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACGG 54956 Query 75526 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG 75585 | | ||||| ||| |||| || || || ||| || || ||||| | || | || Sbjct 54955 TTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTAA 54896 Query 75586 TCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGT 75641 | ||| ||| | | || | ||| |||||||||||||||| ||||| | || | Sbjct 54895 TAA-AAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGATT 54837 Query 75642 TCCTTGAG-TTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCA 75700 | |||| ||| || ||||| ||| | || || ||| |||||| | || | Sbjct 54836 TTATTGATATTAGGAAG-AACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCT 54778 Query 75701 TCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTT 75760 | || |||||||| || |||||||||||||| || || || ||| ||| | | Sbjct 54777 GCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTA 54718 Query 75761 TTCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCT 75819 |||| |||| ||| || || ||| | ||| ||||| |||||||| || || Sbjct 54717 TTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCT 54659 Query 75820 CTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTG 75879 || || || || | || ||| | | || |||| | |||| | | || Sbjct 54658 ATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTATG 54602 Query 75880 GAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGC 75939 | | | ||| | || | || || || ||||| ||||| | | ||||||||||||| Sbjct 54601 GTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGC 54542 Query 75940 TTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCAC 75999 |||||||| || ||| ||||| || || || |||||| ||||| | ||| Sbjct 54541 TTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCTG 54482 Query 76000 GGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGC 76059 |||||| | || ||| ||| | ||||| || |||||||| || ||||| || | || Sbjct 54481 TGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGC 54422 Query 76060 CCTTCCAAAGTATGTCAATGAAG---------------AGACTCGCACTTTTGATTATGA 76104 | | ||| | || ||| |||| ||||| ||| | | | | Sbjct 54421 CTTACCA--GCAT-TCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAA 54365 Query 76105 AAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164 |||| | |||||||| | || ||||||| ||| ||||| |||||||||| | || Sbjct 54364 AAAATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAA 54305 Query 76165 TTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGG 76224 || || || ||||| ||| |||| || |||||| |||| ||||| |||| |||||| Sbjct 54304 TTACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGG 54245 Query 76225 TGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGC 76284 ||||||||||||||| || || || ||| || | |||||||||| || ||||| Sbjct 54244 TGTTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGC 54185 Query 76285 CAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTG 76344 | | | ||| | ||||||||||| || ||||| || ||| |||| || ||| Sbjct 54184 CCGTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTG 54125 Query 76345 TGAATTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAA 76402 |||| | ||| |||| | ||| | || || || || | || ||||| || || ||| Sbjct 54124 TGAACTAGCTCAGAAG--GACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAA 54067 Query 76403 GGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATGTT 76462 || | || ||||||||||||||||| || || | || | || ||||| Sbjct 54066 GGTATACTACAGTTTGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGA-CAC 54008 Query 76463 CTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 76521 || ||| || | |||| | || | ||| || | || || |||||||||||||| Sbjct 54007 CTTAAGAAAAGATATCATGAAGCATGGTATTAGAAATTCCCTGACCATGGCACCAATGCC 53948 Query 76522 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAA 76581 || || ||||| | ||||| |||||| |||||||||| || |||||| ||| | || Sbjct 53947 TACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACCAGTCACTTCCAA 53888 Query 76582 CATCTAC 76588 || ||| Sbjct 53887 TATGTAC 53881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596508764815040