Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04-
25] 8,158 sequences; 13,853,465 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq578 113 4e-20
seq1005 109 5e-19
seq76 107 2e-18
seq731 96.9 3e-15
>seq578
Length=448
Score = 113 bits (124), Expect = 4e-20
Identities = 160/225 (71%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 110275 GCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGA 110334
|||||| |||||||| || | || || || || || ||| | || || || ||
Sbjct 448 GCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGA 389
Query 110335 TACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACA 110394
||| ||| | | || || ||| ||| ||||| ||||| | || ||||||||
Sbjct 388 CACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACA 329
Query 110395 AAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACAT 110454
|||| | |||| ||| ||||| || ||||| || | ||||| || | ||||| |||||
Sbjct 328 AAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACAT 269
Query 110455 TCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||| ||||| ||||||||||| ||||||| ||| || |||| ||
Sbjct 268 TCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 224
>seq1005
Length=22682
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
|| |||||||| || ||||| ||||||||||| || || |||||| | ||| || ||
Sbjct 14225 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 14166
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
|| ||| | | | | || || ||||| ||||| ||||| | || ||
Sbjct 14165 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 14106
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
||||||||| | || | ||| ||||| || |||| |||| ||||| || | || |||
Sbjct 14105 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 14046
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| ||||| |||||||| | ||| |||| || ||| || |||| ||
Sbjct 14045 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 13996
>seq76
Length=21991
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| ||||| ||||| |||||||| || | ||| || || |
Sbjct 450 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 391
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | | || || ||| ||| ||||| ||||| | || ||||||
Sbjct 390 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 331
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|||||| | || | ||| ||||| ||||| || || | ||||| || | |||||||||
Sbjct 330 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 271
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| || || || || || || | ||| |||| || |||| ||
Sbjct 270 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 224
>seq731
Length=28746
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 110282 TTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTC 110341
|||||||| ||||| || || || ||||| || | ||| || || || ||| |
Sbjct 11237 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 11178
Query 110342 GGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTT 110401
| | | || || |||||| ||||| ||||| | || || ||||||||| |
Sbjct 11177 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 11118
Query 110402 ATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAA 110461
|| | ||| ||||| || |||| || | ||||| || | || |||||||||||||||
Sbjct 11117 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 11058
Query 110462 GAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| || |||||| | || || ||| || |||| ||
Sbjct 11057 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 11020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412800552965894
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |