Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04- 25] 8,158 sequences; 13,853,465 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq578 152 5e-32 seq76 138 1e-27 seq1005 136 4e-27 seq1322 114 1e-20 seq731 114 1e-20 seq3733 105 7e-18 >seq578 Length=448 Score = 152 bits (168), Expect = 5e-32 Identities = 169/223 (76%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 134492 TCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGG 134550 ||| | || |||||| | ||| || || ||||||||||| ||||||||||| | ||| | Sbjct 1 TCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGT 60 Query 134551 TGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 | | | || || || || || || ||||||||||| | ||| ||||| || || || | Sbjct 61 TCTACCA-TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATAC 119 Query 134611 CTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGA 134670 ||||||| |||||||| || |||||| ||| | |||||||| ||||| || || | Sbjct 120 CTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTA 179 Query 134671 GAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || || || || |||| |||||| |||||||||||||| Sbjct 180 GGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 222 Score = 104 bits (114), Expect = 2e-17 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || |||||| | || | ||| || || || |||||||| || || | | Sbjct 224 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 283 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || | | | ||| || || || || || ||||||||||| | || ||||| || || Sbjct 284 AGCGTTCT-ACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 342 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||||||||| || || ||| | ||||| || ||||| || Sbjct 343 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAAC 402 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGC 134711 || || || || || ||||| || | || || || ||||||||| Sbjct 403 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGC 448 >seq76 Length=21991 Score = 138 bits (152), Expect = 1e-27 Identities = 166/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 134492 TCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGG 134550 ||| | || |||||| | ||| || || ||||||||||| ||||||||||| | ||| || Sbjct 1 TCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAA-GG 59 Query 134551 TGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 | | ||| || ||||| || || ||||| ||||| | ||| ||||| || || || | Sbjct 60 TTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATAC 119 Query 134611 CTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGA 134670 |||| || || || ||||| || || || | |||||||| ||||| || || | Sbjct 120 CTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTA 179 Query 134671 GAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| |||||||||||||| ||||| ||||| || || ||||| Sbjct 180 AAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 222 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| || | | ||| || |||| ||||| ||||| ||||||||||| || | | Sbjct 224 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 283 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || | | | ||| || ||||| || || ||||| ||||| | || ||||| || || Sbjct 284 AGCGTTCT-ACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 342 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||||||||| || || ||| | || ||||| ||||| || Sbjct 343 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 402 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || |||||||||||||| ||||| || |||||||| ||||| Sbjct 403 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 450 >seq1005 Length=22682 Score = 136 bits (150), Expect = 4e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || ||||| | || ||| || | |||||| || ||||||||||| |||||||||||| | Sbjct 13996 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 14055 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | || || || ||||| ||||| | || || || || || Sbjct 14056 AAAGTTCTACCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 14114 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| || || ||||| ||| | ||||| || ||||| || Sbjct 14115 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 14174 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || ||||| || |||||||||||||| || |||||||||||||| ||| Sbjct 14175 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 14226 >seq1322 Length=12313 Score = 114 bits (126), Expect = 1e-20 Identities = 154/212 (73%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGT 134559 ||| || ||||| || ||||| ||||||||||| |||||||| | || || | | | | Sbjct 12103 CAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA-T 12161 Query 134560 CGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTT 134619 | || || || || || ||||||||||| | ||||| || || || || ||||| || | Sbjct 12162 CTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGT 12221 Query 134620 CTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGG 134679 |||||||||| || || ||| | ||||| || ||||| || || || || || | Sbjct 12222 CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAG 12281 Query 134680 TTTTACCGGTTAAAGTTTTAACGAAAATTTGC 134711 | ||||| || | || || || ||||||||| Sbjct 12282 TCTTACCTGTCAGTGTCTTGACAAAAATTTGC 12313 >seq731 Length=28746 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || ||| || | ||| | |||||||| ||||||||||||||||| | | Sbjct 11020 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 11079 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | ||| || | || || || ||||| ||||| | || || || || || Sbjct 11080 AA-GGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 11138 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || |||||||| ||| ||||| ||| | ||||| || ||||| || Sbjct 11139 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 11198 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 || | ||| ||||| ||||| || ||||| || || ||| Sbjct 11199 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 11238 >seq3733 Length=54387 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || ||| || | |||| |||||||||||||| ||||||||||| Sbjct 17324 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 17265 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | || || || ||||| ||||| | || || || || || Sbjct 17264 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 17205 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || || ||||| ||| | ||||| || ||||| || Sbjct 17204 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 17145 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAA 134704 || | ||| ||||| ||||| || ||||| |||||||| Sbjct 17144 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 17107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505346861998160