Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04-
25] 8,158 sequences; 13,853,465 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq1353 86.0 7e-12
seq2721 84.2 2e-11
seq5623 82.4 8e-11
>seq1353
Length=56646
Score = 86.0 bits (94), Expect = 7e-12
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
|||| |||||||||||| || ||||| | ||||||||||||||||| | ||||||||
Sbjct 53534 GTTCTCAAATAGTACATACCGGTCTTCAATCCCTTCTTCCATCCGTAAAAATGCATACTT 53593
Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309
| || || ||| | | ||| | ||| | || | || || || || || ||
Sbjct 53594 GTTAGTTTACCCATAGTTGGGGCACGTAAGAACAAATTCAAAGAATGAGATTGATCAATA 53653
Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369
|| || || ||||| ||||||| |||| | |||||| | ||| ||||| | |||
Sbjct 53654 TAGACAGAACGATCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTC 53713
Query 78370 CGGTAAATGGCCTTCAGCTCTT 78391
||| | | |||||| ||||
Sbjct 53714 TTGTATAAGTCCTTCAATTCTT 53735
>seq2721
Length=252
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 166346 ATCGAGATCTGTCCTCTGGCGTACATGCGCGGTCGGACGTTCGACAACGCCTGGATTATC 166405
||||||||| || || |||||||||||||| || ||| | || |||| | || |||
Sbjct 125 ATCGAGATCGCGCCGCTCGCGTACATGCGCGGCCGCACGCTGAACCACGCGTTCATCATC 184
Query 166406 GGGGATGAGATGCAGAACTCGACGCCGGGTCAGATGAAGATGCTTCTGACCCGGATCGG 166464
|| ||| ||||||| ||||||| | |||||||||||| | || || ||||||||
Sbjct 185 CTCGACGAGGCGCAGAACACGACGCCCGAGCAGATGAAGATGTTCCTCACGCGGATCGG 243
>seq5623
Length=517
Score = 82.4 bits (90), Expect = 8e-11
Identities = 206/304 (68%), Gaps = 13/304 (4%)
Strand=Plus/Minus
Query 79318 TCGGGCAGGCCCGGGCAC-TCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCA-- 79374
||| ||||| ||||||| ||| ||| | | ||| |||||| || ||||| ||
Sbjct 313 TCGTGCAGGTCCGGGCAGGTCGA-CGGCGAGAACAGCGTCCAGTCGGCG-CCTTC-CATC 257
Query 79375 ACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATC 79434
|| || |||||| ||||| || ||||| |||||| | |||| | |||
Sbjct 256 ACGCGCTTCATGAACAGGTCGGGAATCCAGTTCGCCGTGTTCATGTCGTGCGTACGGCGG 197
Query 79435 TCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGC 79494
||||||||| |||| |||||||| || || ||| ||||||| ||||||||
Sbjct 196 CGATCGTCGCCCGTGTTCTTGCGCAGCTCCAGGAACTCCTCGATGTCGAGGTGCCACGAT 137
Query 79495 TCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCC 79554
|| || || | || || ||||||||||||| ||||||||||||| ||||
Sbjct 136 TCGAGGTACGCGCAGACCGCGCCCTTGCGCTTGC---CGCCCTGGTTGACCGCGACGGCC 80
Query 79555 GTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGAC--GCCGTTCGTCCCGT 79612
|||| ||||| || || | || || | ||| | ||||| ||||||||| || |
Sbjct 79 GTGTCGTTGACGACCTTCAGGAACGGGACCACGCCTT--GCGACTTGCCGTTCGTGCCCT 22
Query 79613 TGAT 79616
||||
Sbjct 21 TGAT 18
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548468864183520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |