Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178045.1_202017-04- 25] 1,441 sequences; 11,513,936 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq696 199 3e-46 >seq696 Length=16610 Score = 199 bits (220), Expect = 3e-46 Identities = 550/836 (66%), Gaps = 43/836 (5%) Strand=Plus/Minus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| ||| ||| | ||||| |||| | || || || ||||| | ||| | | || ||| Sbjct 12625 TTATACACTCATTTTCATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTC 12566 Query 101593 ATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGG 101652 | || || ||||||||| | ||| | || || | ||| | || || || Sbjct 12565 TGTTAACTTGAAATCATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGG 12506 Query 101653 TCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGC 101712 ||| ||| ||| || | || ||| | ||||||||||| ||| ||| | || || Sbjct 12505 TCTTGGATTTCTGGTGATTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGC 12446 Query 101713 ATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCA 101772 ||| || | |||||| || ||||| || ||| | | | || | ||||||||| | Sbjct 12445 ATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCT 12386 Query 101773 AGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCT 101832 ||| || | || ||| |||||||||||||| ||||| |||||||||||| || | Sbjct 12385 AGTCAACAAAGCATATGATGCAATGTTAAATGGTACTCCCAACCCCATATCACAAGAACG 12326 Query 101833 TTGATACAGTTGACAGGAAAG-----------------CTT-TCCATC---------ACA 101865 ||| |||| | || ||||| ||| ||| || || Sbjct 12325 TTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACT 12266 Query 101866 GACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC 101925 |||||| || || || | ||| || |||||||| ||||||| || || | Sbjct 12265 GACATAGAACTGTGAAAAAATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGG 12206 Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG-TTTGTTTTTATAGTATCAATCA 101984 ||||| |||| ||| | || |||||||| |||||| ||||| |||| ||| ||| | Sbjct 12205 GTTCCAGGCACTCATAATGATTCTTCTATC-GTAGGGATTTGTCTTTAGTTTATGAATAA 12147 Query 101985 ACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATATTCT 102043 |||||| ||||| |||| |||| ||| |||| ||| | ||| | || |||| Sbjct 12146 CCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGTCATCG-CACGTCTTGTATTTA 12088 Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCA 102103 || || ||||||||||| ||||||||||| || || || ||||||||| | | || || Sbjct 12087 GCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATCT 12028 Query 102104 TAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC- 102162 | || || | ||||||||| || | ||||||||| | |||||||| | || || Sbjct 12027 TTGAACCCCATCTTATCTAAATATTCACGAGATCCATTACCGTCCCAAATCTTAACACCT 11968 Query 102163 AGCT--GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCA 102220 ||| | |||| || || ||| ||| || | ||||||||| ||||| Sbjct 11967 TGCTCAGACAATAG--GTTAGC-GTCTGTATCACCGGCCAAAAACCACAATAGTTCAAGT 11911 Query 102221 ACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAAA 102277 | | |||||| ||| || |||| || |||| ||||| || |||| |||| Sbjct 11910 ATGATACCTCTAGTAAAGACCTTCTTGGTCGTTAGTAGTGGGAAGGTATCATCACGTAAA 11851 Query 102278 CTAAACCTAGACT---GTGTTCCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTC 102330 ||||| | || ||| | |||||| ||||| || ||||| |||||||| || Sbjct 11850 CTAAAACGCAGCTGGGGTGGTGCAAAAAGACTCAACGTACCAGTGCCTGTTCTATC 11795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361244855638691