Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178045.1_202017-04- 25] 1,441 sequences; 11,513,936 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq671 365 6e-96 seq1067 196 6e-45 >seq671 Length=8911 Score = 365 bits (404), Expect = 6e-96 Identities = 1337/2072 (65%), Gaps = 45/2072 (2%) Strand=Plus/Minus Query 64835 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893 |||| || |||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 3165 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 3106 Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 64953 | | || |||||||||||||||||||||| |||||||| | | || | Sbjct 3105 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 3046 Query 64954 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 65013 || | ||||| ||| ||| |||||| || || | | || || ||||| | Sbjct 3045 GTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATGT 2986 Query 65014 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 65072 | ||||| |||||||||| ||||||||||| ||| || || || || | ||| |||| | Sbjct 2985 TAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCTTGT 2927 Query 65073 GGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCT---TGATC 65126 |||| ||||| || | |||||||| ||| | || ||||| || || | || Sbjct 2926 GGAACGTTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCATA 2870 Query 65127 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 65186 | |||| ||| | | || || | | || | | || || || || || Sbjct 2869 CCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGG 2810 Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246 ||||| || || || || | || | ||| ||||| || ||||| | | | ||| Sbjct 2809 AATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTCA 2750 Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 65306 |||| ||||| ||||| | || |||||||| ||||| ||||||| || |||| Sbjct 2749 TTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT 2690 Query 65307 CTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCCGAC 65363 |||| ||| ||| | | || |||||||| |||| ||||||| ||| | | | Sbjct 2689 CTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCGTAG 2633 Query 65364 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 65423 ||| ||||| ||||| | | || |||||| | Sbjct 2632 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 2573 Query 65424 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 65483 || |||||||| || ||||||| ||||||||||||| || || | | | | |||| Sbjct 2572 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 2513 Query 65484 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 65543 || ||||| ||||| | ||||||| | |||||| ||||||||| || | Sbjct 2512 ATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 2453 Query 65544 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 65603 || || || || | ||| || | ||||||||||| | | | || |||||||||||| || Sbjct 2452 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 2393 Query 65604 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 65663 || || || |||||| || ||| || |||||| ||| || | | | || | ||| Sbjct 2392 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTA 2333 Query 65664 C---TGACAATT-----ACTTTGACCACATCCTTC--AGTT---TGAGAAAATCAAATCG 65710 | | |||| | | ||| | || || |||| || | || || | | Sbjct 2332 CGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCA 2273 Query 65711 --CTCATCTATTACAAACA-TGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACC 65765 |||| || ||| | || | || ||||| || |||| |||||||| || Sbjct 2272 TCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTT 2213 Query 65766 TCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATGGTTCC 65824 |||| | | | | |||| | || ||| ||| ||| || | |||||||| || Sbjct 2212 TCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATGACACC 2154 Query 65825 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 65884 ||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || ||||| Sbjct 2153 TAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACC 2094 Query 65885 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 65944 ||||||| | |||| ||| | ||| | | ||| | | | || || || || || Sbjct 2093 AGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGTCTT 2037 Query 65945 GTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 66004 | |||| | ||||| | ||||| | || |||||||| || || || Sbjct 2036 ACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATC 1977 Query 66005 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 66064 | || |||||| | ||| | | || | ||| || | || | || || Sbjct 1976 GCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACG 1917 Query 66065 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTC 66124 ||||| || |||||||||||||| ||||| || |||||||| | | | |||||| Sbjct 1916 CTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTC 1857 Query 66125 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAA 66184 || || ||||| ||| ||| | || | | |||||| |||||| ||||||| Sbjct 1856 TTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAG 1797 Query 66185 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 66244 ||| | ||| | | ||||| | ||| || || ||||| || | || | || ||||| Sbjct 1796 GTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTT 1737 Query 66245 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATA 66304 ||| |||| | | ||| ||||| | ||| || || ||||| || || || | || || Sbjct 1736 ATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTA 1677 Query 66305 GCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 66364 ||| ||| |||||| ||| || |||||| || || || || |||| || || Sbjct 1676 AGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAAT 1617 Query 66365 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 66424 || || ||| || || || || || || ||||| ||| || ||| ||||| || Sbjct 1616 CAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAAC 1557 Query 66425 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 66484 | ||||| |||||||| | ||| || ||||| || || || ||||| || Sbjct 1556 CAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGC 1497 Query 66485 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 66544 ||| ||||| ||||| ||| | | || ||||| || | ||| | || ||||| | Sbjct 1496 GTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCT 1437 Query 66545 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-T 66603 || || |||| |||||| | ||| | | || || || | ||| | | |||| Sbjct 1436 ACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTTGAC 1378 Query 66604 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAA 66662 ||| ||| | | || || || |||||||||||||||||||||||| |||| |||| Sbjct 1377 CGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAA 1318 Query 66663 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 66722 || |||| || || | ||| | ||||| | ||||||||| | || | || | || Sbjct 1317 AA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATATTG 1259 Query 66723 ATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAAT 66782 | | | || || || |||| | || ||| | || |||||| || | | Sbjct 1258 TAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTATAA 1199 Query 66783 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCT 66842 | ||| || | || | | |||| ||||| | |||| ||| |||| ||| || | ||| Sbjct 1198 AGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGGCA 1139 Query 66843 ATTCTAGCGGCTATAATGGCATAATCCGGATG 66874 ||||| || |||| |||| ||||| ||||| Sbjct 1138 ATTCTGGCCGCTAGGGTGGCGTAATCTGGATG 1107 >seq1067 Length=16331 Score = 196 bits (216), Expect = 6e-45 Identities = 588/899 (65%), Gaps = 13/899 (1%) Strand=Plus/Plus Query 35847 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 35906 |||| |||||||| || |||||||| ||| || | |||||||| || ||||| | Sbjct 140 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 198 Query 35907 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttt 35966 |||| | || || || ||||||||||||||||| || || || || || ||| | Sbjct 199 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 258 Query 35967 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 36026 | || || | | || ||| || ||||| || || | ||| ||||| | | Sbjct 259 TGTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 318 Query 36027 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCAAT 36084 || ||||| |||| | |||||| | || | ||||| | |||| ||||||| Sbjct 319 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 376 Query 36085 AGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATG 36144 || || || || | ||| | || | || ||| | | ||||| Sbjct 377 TTCCACAGCCTCGGTGACAATTTTTTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAATG 436 Query 36145 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 36204 |||| ||| ||||| || ||| ||| | ||| |||||||||| || |||||||| Sbjct 437 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 496 Query 36205 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 36264 |||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| || Sbjct 497 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 556 Query 36265 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC---- 36320 || || || || | ||||| | | |||||||||| ||||| || ||| ||| Sbjct 557 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCA-AACAAGG 615 Query 36321 CGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTG 36380 || || ||| || ||||| || |||||| |||||||||| | || || | Sbjct 616 CGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGG 675 Query 36381 TCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA 36440 | | || ||||| || | | | |||| ||| || || | || ||||| |||| Sbjct 676 TGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCA 735 Query 36441 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATC 36500 | | || |||| || ||||| |||||||| ||||| || |||||||||| Sbjct 736 ACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCT 795 Query 36501 TAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTC 36560 | ||||| | ||| || ||||| || | || ||| | || |||||||| || || | Sbjct 796 TTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATAC 855 Query 36561 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--G 36617 ||||| || || ||||| || | || || ||| || | ||||| | || Sbjct 856 CGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCA 915 Query 36618 TTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATG 36677 || || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || | Sbjct 916 TTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAG 975 Query 36678 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736 | || || || || || | |||||| ||||| || | || || |||| |||| Sbjct 976 AAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 1034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658160944662440