Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178045.1_202017-04-
25] 1,441 sequences; 11,513,936 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq811 197 2e-45
seq1248 172 1e-37
seq960 147 4e-30
seq1104 143 5e-29
seq1015 129 1e-24
seq1438 114 2e-20
>seq811
Length=22233
Score = 197 bits (218), Expect = 2e-45
Identities = 186/237 (78%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| |||||| |||| |||||| ||| ||
Sbjct 16 AATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTT 75
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||| || || | ||||||| || || | ||| || ||||||||||| ||||| |||||
Sbjct 76 ATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTG 135
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || ||||| || ||||| ||||| |||| | || |||||| |||||
Sbjct 136 ATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGA 195
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| ||||| ||||| |||||||| || |||||||| ||||| || || ||||||||
Sbjct 196 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 252
Score = 138 bits (152), Expect = 2e-27
Identities = 178/245 (73%), Gaps = 2/245 (1%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | | || || ||||| || || | ||| || ||| || || ||
Sbjct 479 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 538
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | ||||||| || |||| || || |||||||| || ||||| |||||||| |||
Sbjct 539 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 598
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| ||||| | || | || || ||||||||||| |||
Sbjct 599 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 658
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT--TTTATTAG 193368
||||| | ||||| |||||||| || | || || || || || ||||| | ||||||
Sbjct 659 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 718
Query 193369 TAAAA 193373
| |||
Sbjct 719 TTAAA 723
Score = 125 bits (138), Expect = 1e-23
Identities = 170/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| || | |||| || || || ||
Sbjct 244 AATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTT 303
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || || |||||| || |||| || || |||||||| || || ||||||||
Sbjct 304 GTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTG 363
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || ||||| || || || ||||| | || | || || || |||||
Sbjct 364 ATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGA 423
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| ||||| |||| ||| || |||||||| || | || || ||||| || |||||
Sbjct 424 GGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 480
>seq1248
Length=241
Score = 172 bits (190), Expect = 1e-37
Identities = 173/225 (77%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| || | |||| || || || ||
Sbjct 16 AATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTT 75
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || || |||||| ||| |||| ||| || || |||||||| |||||||||||
Sbjct 76 GTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTG 135
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || |||||||||||||| || || |||| | || |||||| |||||
Sbjct 136 ATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGA 195
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTAC 193348
||| ||||| ||||| |||||||| || |||||||| ||||| ||
Sbjct 196 AGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGAC 240
>seq960
Length=17799
Score = 147 bits (162), Expect = 4e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | |||| || | |||| || || || || ||||||||
Sbjct 8672 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 8613
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| |||||| ||| || ||||| || || ||||| || ||||| ||||| ||||| ||
Sbjct 8612 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8553
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| ||||| || ||||| || |||| || | ||| |||||| || ||||| |||||
Sbjct 8552 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 8493
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||| || || ||||| ||||| |||| || || || || |||||||| ||
Sbjct 8492 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8442
>seq1104
Length=15900
Score = 143 bits (158), Expect = 5e-29
Identities = 162/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191
||||||| ||||| | | || || || | || | ||| || |||||| ||||| |
Sbjct 218 TACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCG 159
Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251
| | ||||||| ||| |||| ||| || ||||||||||| ||||| || || || ||||
Sbjct 158 ACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAG 99
Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311
| || ||||| || ||||| ||||| | || | || |||||| || ||||| ||||
Sbjct 98 GAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAA 39
Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTAC 193348
| ||||| |||||||| || |||||||| ||||| ||
Sbjct 38 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGAC 2
>seq1015
Length=54745
Score = 129 bits (142), Expect = 1e-24
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||||||||| | || | ||||| || | ||||| ||| || |||||
Sbjct 11020 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 11079
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| || |||||| || || ||||| || || ||||| || ||||| ||||| |||||
Sbjct 11080 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 11139
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || || | || | ||| |||||| || ||||| |||
Sbjct 11140 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 11199
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351
||||| | ||| || || ||||| || | || || |||||
Sbjct 11200 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 11240
>seq1438
Length=54370
Score = 114 bits (126), Expect = 2e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| |||| | |||| ||| || || | || || || || |||||
Sbjct 37022 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 37081
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|||| |||||| || || ||||| || || ||||| || ||||| ||||| |||||
Sbjct 37082 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 37141
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || |||| || | ||| ||| || || ||||| |||
Sbjct 37142 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 37201
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336
||||| | ||| || || ||||| ||
Sbjct 37202 ACTTCCAAAGTGATGGTCTTACCAGT 37227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899638194975120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |