Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178045.1_202017-04-
25] 1,441 sequences; 11,513,936 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq960 116 9e-21
seq811 111 4e-19
seq1248 109 1e-18
seq1104 102 2e-16
seq1438 100 7e-16
>seq960
Length=17799
Score = 116 bits (128), Expect = 9e-21
Identities = 153/211 (73%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || |||||||| || |||||||||||||| |||| |||||||| |||||||| |
Sbjct 8651 CAAG-TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCA 8593
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || ||||| | | || |||||||| ||||| |
Sbjct 8592 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 8533
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | |||| ||| || ||||| || |||||||| || |
Sbjct 8532 TCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTAC 8473
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || | |||||| ||||| | ||||| ||
Sbjct 8472 CGGTTAAAGTCTTGACGAAAATTTGCATCTT 8442
>seq811
Length=22233
Score = 111 bits (122), Expect = 4e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||||||||| || |||||||||||||| || | || ||||| || |||||||
Sbjct 274 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTA 332
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||| ||||| | |||||| || || | | ||| |||||||| || || |
Sbjct 333 GCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGA 392
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| || || | || | |||| || || || || | ||| || ||||| |
Sbjct 393 TTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTAC 452
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | |||||| || |||| ||||||
Sbjct 453 CGGTCAAAGTCTTAACAAAGATCTGCAT 480
Score = 105 bits (116), Expect = 2e-17
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| || || || |||||||| | || ||||| || || ||||||||||| | | |||
Sbjct 488 CTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTT 547
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || |||||||| || ||||| ||||| | || || || || | | ||| |||
Sbjct 548 CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCT 607
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| ||||||||||| || || | || | | | || ||| || ||||| |
Sbjct 608 TCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAAT 667
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || || | |||||| ||||| | ||||||
Sbjct 668 GTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 708
Score = 89.7 bits (98), Expect = 1e-12
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
||||||||||| || ||||| ||||| | | ||||| || ||||| || || |||
Sbjct 56 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 115
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|| || || | || || || || | | || |||||||| ||||||||||| ||||
Sbjct 116 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 175
Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087
|| | || | |||| ||| || || || || || ||||| || || || |||||
Sbjct 176 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 235
Query 152088 TTCACGAAGACCTGCAT 152104
|| ||||| | |||||
Sbjct 236 TTGACGAAAATTTGCAT 252
>seq1248
Length=241
Score = 109 bits (120), Expect = 1e-18
Identities = 143/197 (73%), Gaps = 1/197 (1%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||||||||| || |||||||||||||| || | || ||||| ||||||||||
Sbjct 46 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTA 104
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || || || | ||||| || |||| | ||| ||||| || |||||||
Sbjct 105 GTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAA 164
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | |||| ||| || || || || || ||||| || |
Sbjct 165 TCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCC 224
Query 152077 CCGTGAGAGTCTTCACG 152093
| || ||||| || |||
Sbjct 225 CTGTTAGAGTTTTGACG 241
>seq1104
Length=15900
Score = 102 bits (112), Expect = 2e-16
Identities = 142/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
|||||| |||||||| ||||| ||||| || ||||| || | | ||||| ||||||||
Sbjct 199 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 140
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
||| || ||||| || || | || |||||||| | | || |||||||| |||||
Sbjct 139 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 80
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|||||| || || | || | |||| ||| || || || || || ||||| ||
Sbjct 79 AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 20
Query 152075 GCCCGTGAGAGTCTTCACG 152093
|| || ||||| || |||
Sbjct 19 CCCTGTTAGAGTTTTGACG 1
>seq1438
Length=54370
Score = 100 bits (110), Expect = 7e-16
Identities = 147/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||| | ||| | ||| || || |||||||||||||| || | || |||||| ||
Sbjct 37036 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 37095
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||||| | || || || ||||| | || || ||||| | | ||| ||||||||
Sbjct 37096 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 37155
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||| || || |||||| | || | | |||| ||| || ||||| | ||| ||
Sbjct 37156 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 37215
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
|| || || || | |||||| ||||||
Sbjct 37216 GGTCTTACCAGTCAAAGTCTTAACGAAG 37243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153799497222911
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |