Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178045.1_202017-04-
25] 1,441 sequences; 11,513,936 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1438 176 9e-39
seq960 163 6e-35
seq1015 159 7e-34
seq811 156 9e-33
seq1104 127 4e-24
seq1085 123 5e-23
seq1248 118 2e-21
>seq1438
Length=54370
Score = 176 bits (194), Expect = 9e-39
Identities = 159/200 (80%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| ||| ||| ||||||||||||||||||| || || | || || ||
Sbjct 37043 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCC 37102
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || ||||||||||| | |||||||||| || ||||| ||||||||||||
Sbjct 37103 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGG 37162
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || ||||| |||| ||| ||||| | |||||| ||||||
Sbjct 37163 ATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTA 37222
Query 283071 CCCGTCAAAGTCTTAACGAA 283090
|| |||||||||||||||||
Sbjct 37223 CCAGTCAAAGTCTTAACGAA 37242
>seq960
Length=17799
Score = 163 bits (180), Expect = 6e-35
Identities = 153/195 (78%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | | || | ||||| || | ||| || || |||||
Sbjct 8636 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 8577
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | |||||||||| |||||||| ||||||||||||||||| | || || |
Sbjct 8576 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 8517
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||| ||||| || || || |||||||| || |||||||| ||
Sbjct 8516 GTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 8457
Query 283088 GAATATCTGCATTTT 283102
||| || ||||| ||
Sbjct 8456 GAAAATTTGCATCTT 8442
>seq1015
Length=54745
Score = 159 bits (176), Expect = 7e-34
Identities = 154/195 (79%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTG 282955
|| || ||| ||||||||| ||||||||||||| |||| || | || || || | |||
Sbjct 11047 TGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATTG 11105
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
|| || ||||||||||| | |||||||||| || ||||| ||||||||||| |||||
Sbjct 11106 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTT 11165
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
|| || || | || |||||||| |||| ||| ||||| | |||||| |||||||| ||
Sbjct 11166 TGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 11225
Query 283076 CAAAGTCTTAACGAA 283090
||||||||| || ||
Sbjct 11226 CAAAGTCTTGACAAA 11240
>seq811
Length=22233
Score = 156 bits (172), Expect = 9e-33
Identities = 152/193 (79%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| ||||||||||||||||||| |||| || | || || ||||| || || |||||||
Sbjct 289 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCTAGCTGCTTACCGGCAA 347
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
||||||| | ||||| || || ||||| |||||||| ||||| || | || |||
Sbjct 348 AGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGT 407
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
||||||| ||||| || | ||| || || | |||||| || ||||| |||||||||||||
Sbjct 408 TATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAA 467
Query 283087 CGAATATCTGCAT 283099
| || ||||||||
Sbjct 468 CAAAGATCTGCAT 480
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | || || |||||||| ||| || || || |||||||| ||||
Sbjct 481 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 540
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||| | || || ||||| || || |||||||||||||| | |||||| || ||
Sbjct 541 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 600
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||| ||||||||||| || || | || ||| | ||||| || || |||| ||| ||
Sbjct 601 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 660
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | || || || ||||| ||||||||||| ||||| ||||||||
Sbjct 661 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 708
Score = 138 bits (152), Expect = 2e-27
Identities = 158/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||| ||||| ||||| || ||||| || |||| ||||| | || || ||
Sbjct 44 ACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCC 103
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
||||| || |||||||| ||||| | |||||| || |||||||| |||||||||||
Sbjct 104 AGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGA 163
Query 283011 ATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
|| ||| ||||| ||| | || |||||||| |||| ||| || || || || || |||||
Sbjct 164 AT-TTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTT 222
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || | ||| || ||||| || |||||
Sbjct 223 CCCTGTTAGAGTTTTGACGAAAATTTGCAT 252
>seq1104
Length=15900
Score = 127 bits (140), Expect = 4e-24
Identities = 136/180 (76%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||| || |||||||| | ||||| | ||||| |||||||| || ||||||||
Sbjct 180 TCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAA 121
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | ||| ||||| |||||||| ||||||||||| || || | || ||| |
Sbjct 120 ATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTG 61
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| |||||||| |||| ||| || || || || || ||||| || || | ||| || |||
Sbjct 60 TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACG 1
>seq1085
Length=149
Score = 123 bits (136), Expect = 5e-23
Identities = 113/143 (79%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001
|| || || | ||| || || ||||||||||| | |||||||||| || ||||| |||
Sbjct 143 CCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCC 84
Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061
|||||||||||||| | || || | || || ||||| |||| ||| ||||| | ||||
Sbjct 83 TTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTG 24
Query 283062 ATCGTCTTACCCGTCAAAGTCTT 283084
|| |||||||| |||||||||||
Sbjct 23 ATGGTCTTACCAGTCAAAGTCTT 1
>seq1248
Length=241
Score = 118 bits (130), Expect = 2e-21
Identities = 137/182 (75%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| ||||||||||||||||||| |||| || | ||||| |||||||| || || ||||
Sbjct 61 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCATCTTCTAGTTGCTTACCAGCAA 119
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
| ||||| | ||||| || || ||||| || || ||||| ||||| ||| |||
Sbjct 120 AAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTGACGT 179
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
| || |||||||| |||| ||| || || || || || ||||| || || | ||| || |
Sbjct 180 TGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGA 239
Query 283087 CG 283088
||
Sbjct 240 CG 241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046719874250414
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |