Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178065.1_202017-04-
27] 1,144 sequences; 11,569,095 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq255 194 2e-44
seq213 163 3e-35
seq215 143 2e-29
>seq255
Length=15641
Score = 194 bits (214), Expect = 2e-44
Identities = 422/629 (67%), Gaps = 2/629 (0%)
Strand=Plus/Plus
Query 38006 CATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTT 38065
||| || ||| || || | ||| || | |||||| | ||||| |||| || ||||||
Sbjct 5732 CATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTC 5791
Query 38066 TGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAG 38125
| | | | ||| || || || ||||| || | | |||||| || |||||||
Sbjct 5792 TTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAG 5851
Query 38126 CGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAA 38185
| ||||||||||| | |||| | | || || |||||||||| ||| ||||| | ||
Sbjct 5852 CATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAA 5911
Query 38186 TATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGT 38245
||| | | |||||||| | | | | |||||| | || ||| ||||| | ||||
Sbjct 5912 CATAACGGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGT 5971
Query 38246 TTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCAC 38305
|| |||| | || |||| ||| | | || || ||| || | || || ||||
Sbjct 5972 TTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCAC 6031
Query 38306 CTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGT 38365
| ||| ||| || || ||||| |||| || || || || | || || || ||| ||
Sbjct 6032 CAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGT 6091
Query 38366 CATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAA 38425
| ||||| || | | | |||||| ||||||||||| |||||| ||||| || |
Sbjct 6092 CCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGA 6151
Query 38426 ATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTA 38485
| || || ||||| || || | || ||||| |||| | ||||| |||||||
Sbjct 6152 ACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAG 6211
Query 38486 CATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTC 38545
|| | || ||||| | ||||| || ||||| | || ||||| | | ||||||||| |
Sbjct 6212 CAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGAC 6271
Query 38546 TTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAA 38605
||| | || | || | | |||| ||| || ||| || ||||| | ||||
Sbjct 6272 GTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAA 6331
Query 38606 AATAACTATA-TGAATAATCTCTATCGTA 38633
||||||| || |||| ||||||| || ||
Sbjct 6332 AATAACTGTACTGAA-AATCTCTGTCATA 6359
Score = 183 bits (202), Expect = 3e-41
Identities = 549/839 (65%), Gaps = 15/839 (2%)
Strand=Plus/Plus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
|||| ||||||| || | | ||||| | || ||||||| ||| ||||| || ||
Sbjct 4498 TCAATAGTGAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTC 4557
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
|| | ||| |||||||||||||||||||||| || ||||| | || || |
Sbjct 4558 TTCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCA 4617
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969
|| ||| ||| || ||| |||||| ||| | || | |||||||||||
Sbjct 4618 CGTAAGAATAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATG 4677
Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029
| | ||| ||||| || || |||||||| || || |||| | || | | | |
Sbjct 4678 TTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAATTCTTGT 4737
Query 37030 GGTAAATCT---AAATGTTGAATAGAACCATTATGT---AACACAATTGTATTCTTT-AT 37082
|| | || | || |||||| || ||||| ||| | || | || | ||| ||
Sbjct 4738 GGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTGTAATCAGA----TACTGTTTCAT 4793
Query 37083 GTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTG 37142
| | || ||| ||| | | | | || | || || || || || ||||||||
Sbjct 4794 ACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTG 4853
Query 37143 AAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTC 37202
|| || || ||||| || | | | || |||||| ||| |||||| | | ||
Sbjct 4854 GAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTC 4913
Query 37203 ATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATT 37262
||||| || |||||||| ||||| |||||||||||||||||||| || | | |||
Sbjct 4914 ATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATT 4973
Query 37263 TCTCAATCCATG-TGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTG 37321
||| | ||||| | || | ||| || || || | | ||||||||| | | || |
Sbjct 4974 TCTAATACCATGCTTCATGATATCTTTTCTTAAGGT-GTCCCAATCCCA-CATGCCGTAG 5031
Query 37322 GGTTCTT-TAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATAT 37380
|||| || |||||||||| | ||||| ||||||| | || ||||| | | |
Sbjct 5032 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 5091
Query 37381 GTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATAT 37440
|| || || || |||| | | ||||||||| ||| || ||| | | ||||| |||
Sbjct 5092 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 5151
Query 37441 ATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCC 37500
|| ||||| || ||||| ||||||| | ||||| || ||| |||| | |
Sbjct 5152 ATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 5211
Query 37501 AATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTA 37560
|| | || || ||||| | ||| |||||||| | | | || ||||||||| || ||
Sbjct 5212 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 5271
Query 37561 TTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATT 37619
|| ||| | || |||| || || || ||||| ||| || | | | |||| |||
Sbjct 5272 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATT 5330
>seq213
Length=66864
Score = 163 bits (180), Expect = 3e-35
Identities = 415/629 (66%), Gaps = 2/629 (0%)
Strand=Plus/Plus
Query 38006 CATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTT 38065
|||| | || || |||| ||| || | |||||| | ||||| |||| || ||||||
Sbjct 7895 CATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTC 7954
Query 38066 TGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAG 38125
| | | | |||||| || || | ||||| | | ||| ||||| ||||| |
Sbjct 7955 TTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCTG 8014
Query 38126 CGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAA 38185
| |||||||| || | ||| | | || || ||||| || | ||| ||||| | |
Sbjct 8015 CATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCA 8074
Query 38186 TATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGT 38245
||| | | || ||||| | | | | |||||| | | || || || | ||||
Sbjct 8075 CATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGT 8134
Query 38246 TTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCAC 38305
| |||| | ||||||| ||| | | || || || | || | || | ||||
Sbjct 8135 TGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCAC 8194
Query 38306 CTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGT 38365
||||| ||| || || | ||| |||| ||| || |||||| | |||||||| ||| ||
Sbjct 8195 CTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGT 8254
Query 38366 CATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAA 38425
||||||| || | | || ||||| |||||||||||| ||| || || ||||| |
Sbjct 8255 CATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGA 8314
Query 38426 ATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTA 38485
|||| || || || || || |||| || || ||||| ||||||| || | | ||
Sbjct 8315 ATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGTA 8374
Query 38486 CATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTC 38545
|| || ||||| | || || |||||||| | || | ||||| || ||| || || |
Sbjct 8375 CAGATTCGATATCGCTACCATGGATACCTAGCGCCACACGCATTACCAAATGCTGAGGAC 8434
Query 38546 TTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAA 38605
|||| | || | ||| || | || | ||||| || | ||| || | ||| |
Sbjct 8435 GTTCTGCCACTTCACCGTTCAGTCTTAGCAAGTACGAACGCTCCAGTGTCTTGAATCCGA 8494
Query 38606 AATAACTATA-TGAATAATCTCTATCGTA 38633
|||| |||| || | |||| ||||||||
Sbjct 8495 AATACGTATACTGGA-AATCCCTATCGTA 8522
Score = 87.8 bits (96), Expect = 2e-12
Identities = 409/632 (65%), Gaps = 33/632 (5%)
Strand=Plus/Plus
Query 36982 TTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT--- 37038
|||||||| || ||||| || ||||| |||| || |||| | | ||| | || |
Sbjct 6853 TTTTGAGAGATTTCCCAGACGGTTTTGTATAATTCCTTTAATTCTTGTGGCACATTTGGT 6912
Query 37039 AAATGTTGAATAGAACCATTATGTAACACAATTG--TATTCTTT-ATGTCATTATTCCAC 37095
|| ||||||||||||||| ||| |||| |||| ||| || || || |||
Sbjct 6913 AAGCCTTGAATAGAACCATTTTGTGT---AATTAGATATTGTTTCATACTATCATCCCAA 6969
Query 37096 ATATTTCTACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAG 37153
||| | | | | || || | | || | |||||| ||||| || || || ||||
Sbjct 6970 ATAC--CCAGGTCGACTAAATCACGTAGTAAATATGGATTAACAACTTGGAATTCACCAG 7027
Query 37154 ATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTA 37213
| | || | | | || || || || |||||| | | ||||||| || |
Sbjct 7028 ACAGGACACGACGAGAGTACATGTTTGAGGTCACTGGTTCGAAACATTCATTATAACCAA 7087
Query 37214 ATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAG--AAGGCTATTTCTCAATCC 37271
||||| || || || || || ||||||||||| || || || | ||||| || ||
Sbjct 7088 GAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCAT-AGTCAAAGAG-TTTCTTAACCC 7145
Query 37272 ATGTGTATTAATTCTCTTTTTTA--GTTCATTCCAATCCCATAAATCTGTTGGGTT--CT 37327
||| || ||| |||| ||| ||| | ||| ||||| | | ||| || |
Sbjct 7146 GTGTTTAACAATGTCCTTTCTTAAGGTT--TCCCAGTCCCACATGCCAAATGGTTTAGCG 7203
Query 37328 TTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCAT 37387
|| ||||||||| |||||| |||||| || ||||||||| | | | | || ||
Sbjct 7204 TT--CCACATATCGAATTGTAAAATACCCTTGGAAGCTGGAGAACCTTCAAAAGTAGAAT 7261
Query 37388 AAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTT 37447
| || | ||| || | ||| || | ||| || | |||| || || ||||
Sbjct 7262 ATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGAGTAGCATGGTAAATAGTTT 7321
Query 37448 CGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCC-CAATAAT 37506
|||| |||||| | |||| ||| |||||||| || || | ||| | ||| |
Sbjct 7322 CGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCTGATTCAAAGGG-TAGACGCAACATC 7380
Query 37507 ATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA- 37565
||| | ||| ||||||||||| ||||| | | | || |||||||| ||| |||| ||
Sbjct 7381 ATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGTCTATGCTTCATATTTGAA 7440
Query 37566 --TCTAGACGATTCTATCACTGGATAATAATT 37595
||||| | || |||||||| |||||
Sbjct 7441 TTTCTAGCC---TCGGGAACTGGATAGTAATT 7469
>seq215
Length=39372
Score = 143 bits (158), Expect = 2e-29
Identities = 399/602 (66%), Gaps = 24/602 (4%)
Strand=Plus/Minus
Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680
|||| || || ||||| || || |||||||||||||||| || | ||| || |||
Sbjct 38895 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 38836
Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740
|| ||||| |||||||||| |||| ||||| | ||| || || | ||||| |||||
Sbjct 38835 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 38776
Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCT-T 11796
|| || || | || || | | ||||| || |||| |||||| ||| | | | |
Sbjct 38775 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 38716
Query 11797 GTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC----ATTG 11852
| || || |||||| || ||||| || || ||| | || ||| | || |
Sbjct 38715 GCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGATGG 38661
Query 11853 TTTCTATAGCGTTAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTAT 11910
| | || || || || | ||| || ||||| || || | | || ||||| ||
Sbjct 38660 TGTGAATGGCATTGAACAAGAATTCA--CTTTCTTTAGGGTCCTTGATGTAAGTATCGAT 38603
Query 11911 TAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACA 11970
|| || || |||| || ||||||||||| || ||||| || || |||||||
Sbjct 38602 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 38543
Query 11971 TCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAAT 12030
|||||||| | || || || |||| |||| | || || ||||| |||||
Sbjct 38542 CTTTGCCTCTGGAATTTGGACTTCGGTGGAAAAGTTTTCAACCAAGTTTTCATTAACAAT 38483
Query 12031 ACCATCACTAGATGCAAAAAATGCTAGTA-TATGTTTTATAAAGTATTTTTCGTCTTTAG 12089
||| ||| || || ||||| || || | | || || || || | |||| ||| |
Sbjct 38482 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTG-GAAATGAAAAATCTCTCGT-TTTCG 38425
Query 12090 TTAAT----TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAA 12145
|| || || | ||| |||| | ||| || || ||||| | ||||||| |||||||
Sbjct 38424 TTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 38365
Query 12146 AAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATA 12205
||| || | | | || || || |||||| ||||| ||||| |||||||||| |
Sbjct 38364 AAAGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGA 38305
Query 12206 AC 12207
||
Sbjct 38304 AC 38303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468518100095360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |