Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178065.1_202017-04- 27] 1,144 sequences; 11,569,095 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq355 104 2e-17 seq213 84.2 2e-11 >seq355 Length=29176 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || || | | || |||||||| ||||||||||| | Sbjct 12393 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 12334 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || || || ||||||| | |||| | | |||||| || ||||| Sbjct 12333 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 12274 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| |||||| || | | || | ||||||| || || ||| Sbjct 12273 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 12214 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||||| |||| ||| || ||||| |||||||| Sbjct 12213 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 12167 Score = 100 bits (110), Expect = 3e-16 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470 ||||| | | |||||||| ||||||||||| || || || | ||| || || || Sbjct 12142 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTGCCGTCTTCTAGCTG 12083 Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530 ||||||| | |||| | | ||||| || ||||| |||||||| ||||| ||| ||| Sbjct 12082 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT-TGAATTT 12024 Query 138531 TTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCA 138588 | | |||| |||| | | ||| |||| || || || || | || | |||||||| Sbjct 12023 TCGACTTAACGTTGT-CGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCG 11965 Query 138589 GTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| ||| || || ||||||||||| Sbjct 11964 GTCAAAGTCTTGACGAAAATCTGCAT 11939 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||||||||| |||||||| || || | || || ||||||||||||| | Sbjct 13044 GACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCA 12985 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | | || ||||| ||||| |||||||| ||||| ||| |||| | |||| Sbjct 12984 AAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATTTTCGACTTAAC 12926 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | || || ||||| | || | || ||||| ||||| || | Sbjct 12925 GTTG-TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCT 12867 Query 138599 TTACAAAAATCTGCAT 138614 | || ||||| ||||| Sbjct 12866 TGACGAAAATTTGCAT 12851 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || | || | | || |||||||| ||||||||||| | Sbjct 12849 CCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 12790 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || ||||| ||||| | | | || | | |||||| |||||||| Sbjct 12789 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 12730 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||||||||| || ||| |||| |||| | ||| || | ||||||| || || | Sbjct 12729 ATACCTTCTTTATC-TTGAATTTTACTTTTGACGTTG-TCAATAGTGTCGGAAGATTCAA 12672 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || || || |||||||| || ||||| ||||| Sbjct 12671 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 12623 >seq213 Length=66864 Score = 84.2 bits (92), Expect = 2e-11 Identities = 312/484 (64%), Gaps = 14/484 (3%) Strand=Plus/Plus Query 153087 GGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCC 153146 ||||| || |||| |||| || || ||||| | || | ||||| ||||| ||| Sbjct 7063 GGTTCGAAACATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCC 7122 Query 153147 ACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 | |||||| || | || ||||| |||||| | | || | | ||| ||| Sbjct 7123 ATAGTCAAAGAGTTTCTTAACCCGTGTTTAACAATGTCCTTTCTTAAGGTTTCCCAGTCC 7182 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGT--AACACTCCTCGACTGGCGG 153264 |||| | | ||| | ||||||||||| ||| | ||| || || | | || || | Sbjct 7183 CACATGCCAAATGGTTTAGCGTTCCACATATCGAATTGTAAAATACCCTTGGA--AGCTG 7240 Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGA 153324 || || |||| ||| || | || || |||||||| ||| ||| || || | Sbjct 7241 GAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAA 7300 Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCT 153384 | | ||| ||| || |||||| ||||||||| || ||| |||||||| | Sbjct 7301 GAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCTGATT 7360 Query 153385 CGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGG 153444 | | || | |||| || || | | | ||||||| |||||||| ||| | | || | Sbjct 7361 CAAAGGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAG 7420 Query 153445 GTCGATGCTTC-TCGTTG--CTGC--GCCTCGCGCTCGCTATGGGATAGTGATTGCGATC 153499 ||| ||||||| | ||| | | |||||| | | ||||||| ||| || || Sbjct 7421 GTCTATGCTTCATATTTGAATTTCTAGCCTCG-----GGAACTGGATAGTAATTACGGTC 7475 Query 153500 GATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATC 153559 ||||| | |||| | |||| | | ||||||| ||| | | | | ||||||||| Sbjct 7476 GATAACTCTGTTCAAGTTGTGGGTAATGACTTTAGCAATCTCGTGTAATCTCTCGAAATT 7535 Query 153560 ATAG 153563 |||| Sbjct 7536 ATAG 7539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496255303447680