Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178065.1_202017-04-
27] 1,144 sequences; 11,569,095 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq831 152 4e-32
seq355 143 2e-29
seq542 127 2e-24
seq229 104 2e-17
seq940 93.3 3e-14
>seq831
Length=57240
Score = 152 bits (168), Expect = 4e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| || | || || || || || |||||||| ||||| || ||||| ||||
Sbjct 48552 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 48611
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||||| |||| |||||||||||||| ||||| ||||| | ||||| || || |||
Sbjct 48612 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 48671
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || ||||| || || || ||| | || | ||||||||| | ||| |||
Sbjct 48672 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 48731
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || | || || ||||||||||| || || || || |||||
Sbjct 48732 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 48778
>seq355
Length=29176
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| || | || || | ||||| |||||||| ||||| || ||||| || |
Sbjct 12849 CCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 12790
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||||| |||| || | ||||||||| ||||| ||||| | ||||||||| || ||
Sbjct 12789 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 12730
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| |||||||||||||||||||| ||| || | || | |||||| || | ||| ||
Sbjct 12729 ATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 12670
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || | || || || |||| |||||| || || || |||||
Sbjct 12669 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 12623
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| || | || || ||||| | ||||| ||||| || || || ||||| |
Sbjct 12621 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 12562
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||||| | || |||| ||||||||| ||||| ||||| | |||||||| || |||
Sbjct 12561 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 12502
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || ||||||||||| || || | || | ||||||||| | ||| ||
Sbjct 12501 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 12442
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || | || || || || | || || ||||| || |||||
Sbjct 12441 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 12395
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||||| | || || | ||| | ||| || || || || || |||||||| |
Sbjct 12165 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 12106
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||||| | || || | |||||||| ||||| ||||| | |||||||| || ||
Sbjct 12105 AGCGTTCTGCCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 12046
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || ||||||||||| || || | || | || || || | ||| |||
Sbjct 12045 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 11986
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | || | ||||| ||||| ||||| || || || ||||||||
Sbjct 11985 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 11939
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||| || || || ||||| |||||||| || | | ||||| |||| || | |||
Sbjct 13053 TGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGT 12994
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| ||||| ||||| | || || || || ||||| ||||| || |||||||||||
Sbjct 12993 TTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTC 12934
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||||||| | ||| || || || || | || || || ||
Sbjct 12933 GACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTC 12874
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || || || || |||||
Sbjct 12873 AGTGTCTTGACGAAAATTTGCAT 12851
>seq542
Length=78881
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||||||| | || || ||||| | || ||||| ||||| || ||||| || |
Sbjct 38479 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 38538
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||||| | || |||||||||||||| ||||| ||||| | ||||| || || ||
Sbjct 38539 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 38598
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || ||||| || || || ||| | || | ||||||||| | ||| |||
Sbjct 38599 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 38658
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460
|| | ||||| || || || || ||||| || || ||
Sbjct 38659 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 38696
>seq229
Length=66292
Score = 104 bits (114), Expect = 2e-17
Identities = 153/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| || | || ||||| || | || ||||||||||| || ||||| || |
Sbjct 30282 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 30223
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || |||||||||||| ||||| ||||| | ||||| || || ||
Sbjct 30222 A-AGNNNNNNNNNN---CAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 30167
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || |||||||| ||| || ||| | || | ||||||||| | ||| |||
Sbjct 30166 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 30107
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460
|| | ||||| || || || || ||||| || |||||
Sbjct 30106 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 30069
>seq940
Length=149
Score = 93.3 bits (102), Expect = 3e-14
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 101306 GTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATG 101365
||||| | || |||||||||||||| ||||| ||||| | ||||| || || || ||
Sbjct 149 GTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATA 90
Query 101366 CCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCA 101425
||||| || ||||| || || || ||| | || | ||||||||| | ||| |||||
Sbjct 89 CCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCC 30
Query 101426 AGAGTGACCGTTTTGCCGGTTAAAGTTTT 101454
| ||||| || || || || ||||| ||
Sbjct 29 AAAGTGATGGTCTTACCAGTCAAAGTCTT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396272874888408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |