Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178065.1_202017-04- 27] 1,144 sequences; 11,569,095 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq255 325 5e-84 >seq255 Length=15641 Score = 325 bits (360), Expect = 5e-84 Identities = 916/1389 (66%), Gaps = 42/1389 (3%) Strand=Plus/Minus Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286 ||| | |||||| | ||||||||||| ||| || || ||| || || || || || Sbjct 6254 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 6195 Query 75287 AAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345 |||||| | || ||| || | |||||| | ||||| | |||||||| ||||| || Sbjct 6194 TTGATGTCTCTAAAATATTTT-ACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 6136 Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405 || ||| || |||||| ||| ||| | | |||| ||||||||||| ||| | || || Sbjct 6135 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 6076 Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465 || | || | | ||| ||||| || || || ||||| |||||||| | || Sbjct 6075 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 6016 Query 75466 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 75525 |||||| | | | | | | ||| ||| || ||||| ||| || | || Sbjct 6015 TATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACGG 5956 Query 75526 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG 75585 | | ||||| ||| |||| || || || ||| || || ||||| | || | || Sbjct 5955 TTTAATTCCTATGATTCGTGTTTTCAATAACACCGCCCGTTATGTTGACCAGGGTGGTAA 5896 Query 75586 TCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGT 75641 | ||| ||| | | || | ||| |||||||||||||||| |||||| | || | Sbjct 5895 TAA-AAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATCTTTGATT 5837 Query 75642 TCCTTGAG-TTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCA 75700 | |||| ||| || ||||| ||| | || || ||| |||||| | || | Sbjct 5836 TTATTGATATTAGGAAG-AACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCT 5778 Query 75701 TCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTT 75760 | || |||||||| || |||||||||||||| || || || ||| ||| | | Sbjct 5777 GCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTA 5718 Query 75761 TTCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCT 75819 |||| |||| ||| || || ||| | ||| ||||| |||||||| || || Sbjct 5717 TTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCT 5659 Query 75820 CTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTG 75879 || || || || | || ||| | | || |||| | |||| | | || Sbjct 5658 ATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTATG 5602 Query 75880 GAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGC 75939 | | | ||| | || | || || || ||||| ||||| | | ||||||||||||| Sbjct 5601 GTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGC 5542 Query 75940 TTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCAC 75999 |||||||| || ||| ||||| || || || |||||| ||||| | ||| Sbjct 5541 TTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCTG 5482 Query 76000 GGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGC 76059 |||||| | || ||| ||| | ||||| || |||||||| || ||||| || | || Sbjct 5481 TGAAATTGTTGAATACTCAGCTCCAGATGAAACAGCTGTTTGTAACTTGGCTTCCGTTGC 5422 Query 76060 CCTTCCAAAGTATGTCAATGAAG---------------AGACTCGCACTTTTGATTATGA 76104 | | ||| | || ||| |||| ||||| ||| | | | | Sbjct 5421 CTTACCA--GCAT-TCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAA 5365 Query 76105 AAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164 |||| | |||||||| | || ||||||| ||| ||||| |||||||||| | || Sbjct 5364 AAAATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAA 5305 Query 76165 TTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGG 76224 || || || ||||| ||| |||| || |||||| |||| ||||| |||| |||||| Sbjct 5304 TTACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGG 5245 Query 76225 TGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGC 76284 ||||||||||||||| || || || ||| || | |||||||||| || ||||| Sbjct 5244 TGTTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGC 5185 Query 76285 CAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTG 76344 | | | ||| | ||||||||||| || ||||| || ||| |||| || ||| Sbjct 5184 CCGTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTG 5125 Query 76345 TGAATTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAA 76402 |||| | ||| |||| | ||| | || || || || | || ||||| || || ||| Sbjct 5124 TGAACTAGCTCAGAAG--GACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAA 5067 Query 76403 GGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATGTT 76462 || | || ||||||||||||||||| || || | || | || ||||| Sbjct 5066 GGTATACTACAGTTTGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGA-CAC 5008 Query 76463 CTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATG 76519 || ||| || | |||| | || | ||| || | | | || || |||||||||||| Sbjct 5007 CTTAAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAATG 4950 Query 76520 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACA 76579 || || || ||||| | ||||| |||||| |||||||||| || |||||| ||| | Sbjct 4949 CCTACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACCAGTCACTTCC 4890 Query 76580 AACATCTAC 76588 || || ||| Sbjct 4889 AATATGTAC 4881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596561069054720