Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq493 96.9 4e-15 >seq493 Length=13486 Score = 96.9 bits (106), Expect = 4e-15 Identities = 281/432 (65%), Gaps = 8/432 (2%) Strand=Plus/Plus Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 || || |||||| || | ||||||||||| | ||| | |||||||||||| ||||| Sbjct 422 CATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAA 481 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAAT 16321 || ||||| | |||| || || |||||||| || | ||||| || || || || || Sbjct 482 CCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAG 541 Query 16322 ATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA 16381 | ||| |||| || ||||| || | || || ||| | || || || | || Sbjct 542 ACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA 601 Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTT----GTTTTATACAATCCATCGTTTCTATGGC 16437 |||||| | |||||||||| || | | ||| | || || | ||||| Sbjct 602 ATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCT----GGGATGGTGTGAATGGC 657 Query 16438 CTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497 || ||||| || |||| | | || | || || ||||| |||| || ||| Sbjct 658 ATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAGGAGTA 717 Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557 |||| ||||| || || || || || || || || ||||| | ||||| | Sbjct 718 AGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGG 777 Query 16558 TATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617 ||||| ||||| | | || ||| ||| ||| ||||| || ||||||||| || Sbjct 778 AATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGC 837 Query 16618 AGCAAAAAACGC 16629 || ||||| || Sbjct 838 GGCGAAAAAGGC 849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511374471320720