Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1190 170 1e-37 >seq1190 Length=16663 Score = 170 bits (188), Expect = 1e-37 Identities = 424/644 (66%), Gaps = 31/644 (5%) Strand=Plus/Minus Query 96912 CATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCATTTGCTTTAAAATC 96971 ||||| || || || | ||| ||||| | ||| | || ||| || || ||||| Sbjct 12657 CATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTCTGTTAACTTGAAATC 12598 Query 96972 ATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGT 97031 |||||| | || | || || ||||||| | ||||| || || ||| ||| || Sbjct 12597 ATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGT 12538 Query 97032 AAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTG 97091 | || ||| | | ||||||||||| | ||||| || ||||| || ||||| || Sbjct 12537 GATTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATG 12478 Query 97092 AATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATA 97151 ||| || || || || | | || || | || ||||| | ||| || | || ||| Sbjct 12477 AATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAAAGCATA 12418 Query 97152 GCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACA 97211 ||||||||||| || || || | ||||||||| || | ||| || || || Sbjct 12417 TGATGCAATGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAATAAGCA 12358 Query 97212 GGAAAG-----------------CTT-TCCATC---------ACACACATAAAACTGACT 97244 ||||| ||| ||| || || ||||| ||||| Sbjct 12357 TGAAAGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGA 12298 Query 97245 CAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACAT 97304 || | ||| || || ||||| |||||||| || ||| ||||| |||| ||| Sbjct 12297 AAAAATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCAT 12238 Query 97305 CAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATC 97364 | |||||||||||| || ||||| | || ||| ||| | ||| || |||||||| Sbjct 12237 AATGATTCTTCTATCGTAGGGATTTGTCTTTAGTTTATGAATAACCTGTTTCAATTGATC 12178 Query 97365 AACGCCTTCTCCACCATAATTGTGCTTAAGAC--CTTGATATTCTGCTCCAAAATGCCTC 97422 || |||| |||| ||| | || | | || |||| |||| || |||||||||||| Sbjct 12177 AATACCTTGTCCAGTATAGTCGT-CATCGCACGTCTTG-TATTTAGCACCAAAATGCCTC 12120 Query 97423 CATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTA 97482 ||||| ||||||||||| || || || |||||| ||| ||||| ||| || | |||| Sbjct 12119 CATTGAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATCTTTGAACCCCATCTTA 12060 Query 97483 TCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC 97526 |||||||| | ||||||||| | |||||||| | ||||| Sbjct 12059 TCTAAATATTCACGAGATCCATTACCGTCCCAAATCTTAACACC 12016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346757601718220