Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04-
25] 6,246 sequences; 12,545,896 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq533 107 1e-18
seq1059 84.2 2e-11
seq488 82.4 6e-11
>seq533
Length=22649
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || ||||| ||||| ||||||||||||| || ||| ||| |||||||
Sbjct 8659 ACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 8600
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| ||
Sbjct 8599 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGG 8540
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||||| | || ||| | ||| || | ||
Sbjct 8539 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTA 8480
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| || || || || ||||||||||| ||
Sbjct 8479 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8448
>seq1059
Length=424
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| |||||| || ||||| ||||| ||||||||||| | || ||| ||| ||||||
Sbjct 2 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 61
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
| ||| || || ||| | || | ||| ||||||||| || | ||||| ||||| |
Sbjct 62 AGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGA 121
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | ||||| | ||| |||||| | || || | ||| || | ||
Sbjct 122 ATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTC 181
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| || | ||||| || |||||||||||
Sbjct 182 CCTGTTAGAGTTTTGACGAAAATTTGCAT 210
>seq488
Length=253
Score = 82.4 bits (90), Expect = 6e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| ||||||||||||||||||||||| | || ||| ||| ||||||||||| || ||
Sbjct 167 GTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCA 226
Query 18189 GCATAGATAAGTCTTTGTTGATC 18211
||| |||| | ||||||||| ||
Sbjct 227 GCAAAGATCAATCTTTGTTGGTC 249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379315123149270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |