Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04-
25] 6,246 sequences; 12,545,896 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1257 179 7e-40
seq533 178 2e-39
seq1059 147 4e-30
seq148 138 2e-27
seq487 118 2e-21
seq1094 113 8e-20
>seq1257
Length=777
Score = 179 bits (198), Expect = 7e-40
Identities = 172/218 (79%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| |||| |||||||| || || ||||| ||||| || || || || || |||||||
Sbjct 547 CAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTA 488
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|||||| ||||| || || | ||||||||| || || || || ||||||||||||||||
Sbjct 487 GCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAA 428
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
| || | ||| ||| |||||||| || | ||||| |||||||| || |||||||| |
Sbjct 427 TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTAC 368
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTA 68471
| || | ||||||||||| |||||||| || ||||||
Sbjct 367 CGGTCAAAGTCTTGACGAAAATCTGCATAAT-CTATTA 331
Score = 143 bits (158), Expect = 5e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || || || || ||||||||||| || || || | || || || ||||||
Sbjct 776 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCT 717
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| ||||| || || | || ||||| || || || || ||||||||||| ||
Sbjct 716 AGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGG 657
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| || | ||| ||| ||||| ||||| | ||||| || || || |||||||||||
Sbjct 656 ATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTA 597
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | ||||| || || ||||||||
Sbjct 596 CCGGTCAAAGTCTTAACAAAGATCTGCAT 568
>seq533
Length=22649
Score = 178 bits (196), Expect = 2e-39
Identities = 167/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||||||||| || || || ||||||||||| || ||||| | || || |||||
Sbjct 8663 CAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 8604
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| |||||||| |||||||||||
Sbjct 8603 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 8544
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || || ||||| | ||||| ||||||| ||| || ||
Sbjct 8543 TTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGT 8484
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || |||||
Sbjct 8483 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8451
>seq1059
Length=424
Score = 147 bits (162), Expect = 4e-30
Identities = 152/199 (76%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| || | ||| |||||||| || ||||||||||| || || || || || ||
Sbjct 226 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 285
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| | ||||| ||||| || || | ||||||||| || || ||||| |||||||||||
Sbjct 286 TTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 345
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| || | ||| ||| ||||| ||||| | ||||| || || | ||| || ||
Sbjct 346 TTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 405
Query 68429 TTTTCCCGTGAGGGTCTTG 68447
|| || || || ||||||
Sbjct 406 CTTACCTGTCAGTGTCTTG 424
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || || || || ||||||||||| || || || | || || |||||||||
Sbjct 2 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 61
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||||| || || || || | ||| ||||| || || || || ||||| || ||||||
Sbjct 62 AGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGA 121
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| |||||| || || ||||| | ||||| || || | ||| || || ||
Sbjct 122 ATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTC 181
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || |||||||| || |||||
Sbjct 182 CCTGTTAGAGTTTTGACGAAAATTTGCAT 210
>seq148
Length=12247
Score = 138 bits (152), Expect = 2e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || | ||| || |||||||| ||||| || || || || || || || || |||||
Sbjct 12049 CAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATC 12108
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| ||||| ||||| || || | |||||| ||||| || ||||| |||||||||||
Sbjct 12109 TTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC 12168
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| || | ||| ||| || || ||||| | ||||| || || | ||| || ||
Sbjct 12169 TTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 12228
Query 68429 TTTTCCCGTGAGGGTCTTG 68447
|| || || || ||||||
Sbjct 12229 CTTACCTGTCAGTGTCTTG 12247
>seq487
Length=17658
Score = 118 bits (130), Expect = 2e-21
Identities = 107/135 (79%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || || || | |||||||||||| ||||| || ||||||||||||||||||||
Sbjct 17658 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTT 17599
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
|| |||||| || || ||||| | ||||| |||||||| |||||||| || || ||
Sbjct 17598 TGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 17539
Query 68438 GAGGGTCTTGACGAA 68452
| |||||||| ||
Sbjct 17538 CAAAGTCTTGACAAA 17524
>seq1094
Length=17280
Score = 113 bits (124), Expect = 8e-20
Identities = 106/135 (79%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || || || | |||||||||||| ||||| || |||||||||||||| |||||
Sbjct 17280 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTT 17221
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
| |||||| || |||||||| | ||||| |||||||| |||||||| || || ||
Sbjct 17220 GGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 17161
Query 68438 GAGGGTCTTGACGAA 68452
| ||||| |||||
Sbjct 17160 CAAAGTCTTAACGAA 17146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921550444331120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |