Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq4219 749 0.0 seq1413 199 2e-46 >seq4219 Length=1332 Score = 749 bits (830), Expect = 0.0 Identities = 524/610 (86%), Gaps = 43/610 (7%) Strand=Plus/Minus Query 17865 GCGCAAGTTTGTGGGCACCTTCCGCCACCTGGACGCATGGGAAGGTCTGGGCACGATCCG 17924 |||||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||| Sbjct 1115 GCGCAAGTTTGTCGGCACGTTCCGCCACCTGGACGCATGGGACGAGCTGGGCACGATCCG 1056 Query 17925 GCACACGCCGTTCCGCAAGGTGTACGACCCGGCCCACGACGAATGCGCGGACGTGTCGAG 17984 ||||||||| ||||||||||||||| ||||||| | ||| ||| || ||||| Sbjct 1055 GCACACGCCATTCCGCAAGGTGTACAACCCGGCACGCGATGAA------GATTTGTCGGA 1002 Query 17985 CGGCCCCAGCTACGTCGCCTTCGCCCGCCTGCCCGCCGGCGCGGACGTCAAAGAGTGGTG 18044 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1001 CGGCCCCAGCTACGTCGCCTTCGCCCGCCTGCCCGCCGGCGCGGACGTCAAAGAGTGGTG 942 Query 18045 CTTCGCCATCGAGGACAGTCTGTCGTCGCACGGCTGCGCGCACGAGTACGACTGCTGCGG 18104 | |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 941 CCTCGCCATCGAGGACAGCATGTCGTCGCACGGCTGCTCGCACGAGTACGACTGCTGCGG 882 Query 18105 CTGCGCGTCGCGCTACGCCCGCGTGACGCCCTATCGCGGCCGCGTGGTGCGGATCAGCGT 18164 |||||| |||| |||||| || ||| || || |||||||||||||||||||||||||| Sbjct 881 CTGCGCCTCGCACTACGCGCGGGTGTATCCGTACCGCGGCCGCGTGGTGCGGATCAGCGT 822 Query 18165 CGGCGTGTCCTACAACTACTGACCAACGCAACACGAAGGGGAACGACGATGGCACGAATC 18224 |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct 821 CGGCGTGTCCTACAACTACTGACCAACGCAACGCCAAGGGGAACGACGATGGCACGAATC 762 Query 18225 AAGGCTGACGAGGTTTGCGTGGGCGACAAGATCGTCCGCCCCGGCGATGCGATTTACGAA 18284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 761 AAGGCTGACGAGGTTTGCGTGGGCGACAAGATCGTCCGCCCCGGCGATGCGATTTACGAA 702 Query 18285 GTCGTGGCGCTCGAATGGTTCACGGTCACGGTACATCTGCATTGCGTCGAGCGCCGCGTG 18344 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 701 GTCGTGGCGCTCGAATGGTTCACGGTCACGGTGCATCTGCATTGCGTCGAGCGCCGCGTG 642 Query 18345 GCCAAGC-------------------------------------TCGACCGACACGAGGC 18367 ||||||| |||||| | Sbjct 641 GCCAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGAGAC 582 Query 18368 GTTTTCGTACAACCGCGACGAAAAGGTCGAGGTTGCCTGACAACCGCTCCCGCTACAGGA 18427 ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 581 GTTCTCGTACAACCGCGACGAAAAGGTCGAGGTTGCCTAACAACCGCTCCCGCTACAGGA 522 Query 18428 GAAAGACGTG 18437 ||| ||| || Sbjct 521 GAACGACATG 512 >seq1413 Length=188 Score = 199 bits (220), Expect = 2e-46 Identities = 137/155 (88%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 9110 CATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCG 9169 |||||||||||||||||| ||||||||||||||||||||||||||||| || ||| ||| Sbjct 34 CATGGCATCCGTCAACAAGGTCATCCTCGTCGGCAATCTCGGCGCCGATCCTGAAGTCCG 93 Query 9170 CTACCTCCCGAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACAA 9229 ||||| |||||||||||||| | | || |||||||||||||||||||| || ||||| Sbjct 94 TTACCTGCCGAGCGGCGACGCGGTTGCGAACATCCGTCTCGCGACGACCGACCGTTACAA 153 Query 9230 GGACAAGGCGAGCGGCGAGTTCAAGGAAGTGACCG 9264 ||||||||| |||||||| ||||||||| |||||| Sbjct 154 GGACAAGGCTAGCGGCGATTTCAAGGAAATGACCG 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200547932502456