Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04-
25] 6,246 sequences; 12,545,896 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1257 114 3e-20
seq1059 114 3e-20
seq148 104 6e-17
seq533 86.0 1e-11
>seq1257
Length=777
Score = 114 bits (126), Expect = 3e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485
||| ||||| || |||||||||| ||||||||||| ||| || || || ||||| |||||
Sbjct 771 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTG 712
Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545
||| ||||| ||||| | | ||| || || ||| || ||||| ||||| || ||
Sbjct 711 CTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTT 652
Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
||| ||| |||| ||||| | | ||| || || || ||||| || ||||| ||
Sbjct 651 CGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGT 592
Query 199606 GAGAGTTTTCACAAAAATTTG 199626
| ||| || ||||| || ||
Sbjct 591 CAAAGTCTTAACAAAGATCTG 571
>seq1059
Length=424
Score = 114 bits (126), Expect = 3e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485
||| ||||| || |||||||||| ||||||||||| ||| || || |||||||| || ||
Sbjct 7 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTG 66
Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545
||| || || || || | | ||| || |||||| || |||||| || ||||||||
Sbjct 67 CTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTT 126
Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
|| ||| || | ||||| | | ||| || || | || || ||||| || ||
Sbjct 127 ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGT 186
Query 199606 GAGAGTTTTCACAAAAATTTG 199626
|||||||| || ||||||||
Sbjct 187 TAGAGTTTTGACGAAAATTTG 207
>seq148
Length=12247
Score = 104 bits (114), Expect = 6e-17
Identities = 143/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474
|||| ||||||||| ||||| ||||||||||| | |||||||| | || || || |||
Sbjct 12047 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 12106
Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534
||||| || ||||| ||||| || || | | |||||||| ||| ||| |||||
Sbjct 12107 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 12166
Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594
|| ||||| || ||| ||| || | ||||| | | ||| || || | || ||
Sbjct 12167 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 12226
Query 199595 GTCTTACCCGTGAGAGTTTT 199614
|||||||| || || || ||
Sbjct 12227 GTCTTACCTGTCAGTGTCTT 12246
>seq533
Length=22649
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| | | ||||| || || ||||| ||||||||||| || |||||| |||| ||||||
Sbjct 8572 AAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACA 8631
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024
|||| || || |||||||| ||| | || ||||||
Sbjct 8632 TCCAAAAGGAATCTACTCTACACTTGGTCTTGAGA 8666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178827254588482
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |