Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq1206 2046 0.0 seq2544 172 1e-38 seq1822 154 4e-33 >seq1206 Length=1451 Score = 2046 bits (2268), Expect = 0.0 Identities = 1191/1243 (96%), Gaps = 22/1243 (2%) Strand=Plus/Plus Query 8968 GTTCCTAAGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCG 9027 || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 192 GTACCTCGGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCG 251 Query 9028 TTGTAGAAAGAAGCTCACGGAACGGACCCACGACGATGCAGCGGCAGATCGGTTTTGCGG 9087 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 252 TTGTAGAAAGAAGCTCACGGAACGGACCCACGACGATGCAGCGGCAGATCGGTTTTGCGG 311 Query 9088 AAGCGGAAAGTGCGGGCAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGG 9147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 312 AAGCGGAAAGTGCGGGCAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGG 371 Query 9148 AGAAGGTCGTCCCTTGGTCGCGGCTGCTGTCGGTGATCGGGCCGTATTACCCGAAGGGCG 9207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 372 AGAAGGTCGTCCCTTGGTCGCGGCTGCTGTCGGTGATCGGGCCGTATTACCCGAAGGGCG 431 Query 9208 AGCGTGGCCGGCCGCCGATTGGCCTGGAACGGATGCT----------------------G 9245 ||||||||||| | Sbjct 432 AGCGTGGCCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG 491 Query 9246 CGGATCTACTTGCTGCAGCAGTGGTACGGGTTGTCGGACGAAGGGCTTGAAGATGCGCTC 9305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 492 CGGATCTACTTGCTGCAGCAGTGGTACGGGTTGTCGGACGAAGGGCTTGAAGATGCGCTC 551 Query 9306 TACGACAGCATCGCGATGCGCGCCTTCGCGGGCATCGACCTGGCGCGCGAGAACGTGCCG 9365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 552 TACGACAGCATCGCGATGCGCGCCTTCGCGGGCATCGACCTGGCGCGCGAGAACGTGCCG 611 Query 9366 GACGCCACCACGCTGTTGAAATTCCGGCGCCTGCTGGTCGAGCACGCACTGACGCGAAAG 9425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 612 GACGCCACCACGCTGTTGAAATTCCGGCGCCTGCTGGTCGAGCACGCACTGACGCGAAAG 671 Query 9426 CTGTTCGACGAGATCGGCATCGAGTTGTGCGAGCGCGGGCTGATGATGAAGGAAGGCACG 9485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 672 CTGTTCGACGAGATCGGCATCGAGTTGTGCGAGCGCGGGCTGATGATGAAGGAAGGCACG 731 Query 9486 CTGGTGGATGCGACGATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGAGCCGT 9545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 732 CTGGTGGATGCGACGATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGAGCCGT 791 Query 9546 GACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCCAT 9605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 792 GACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCCAT 851 Query 9606 GTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACGAG 9665 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 852 GTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACGAG 911 Query 9666 CCGGACGTATCGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCGAT 9725 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 912 CCGGACGTATCGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCGAT 971 Query 9726 GCGGGCTACACCGGCGTGGACAAGCGCGAGGAGATGAAGGGCAAGACGGTGAAGTGGCAC 9785 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 972 GCGGGCTACACCGGCGTGGACAAGCGCGAGGAGATGAAGGGCAAGACGGTGAAGTGGCAC 1031 Query 9786 GTGGCGCTCAAGCGCGGAAAGATCAGGGCGATGCAGGAAGGTCCGCTGAAGGACCTCGTG 9845 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1032 GTGGCGCTCAAGCGCGGAAAGATCAGGGCGATGCAGGAAGGTCCGCTGAAGGACCTCGTG 1091 Query 9846 ATCGCGGTCGAGCGAACCAAGGCGCAGATCCGCGCCCGGGTCGAGCATCCGTTTCATGTC 9905 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1092 ATCGCGGTCGAGCGAACCAAGGCGCAGATCCGCGCCCGGGTCGAGCATCCGTTTCATGTC 1151 Query 9906 GTGAAGAACCTGTTTCGTCATCGCAAGGTGCGCTACAAGGGTCTAGCCAGGAACACGGCA 9965 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1152 GTGAAGAACCTGTTTCGTCATCGCAAGGTGCGCTACAAGGGTCTAGCCAGGAACACGGCA 1211 Query 9966 CAGCTGTTCAGTCTGTTCGCGCTGGCGAACCTGGTGATCGCGAAAAATCAGCTGTTGTCG 10025 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1212 CAGCTGTTCAGTCTGTTCGCGCTGGCGAACCTGGTGATCGCGAAAAATCAGCTGTTGTCG 1271 Query 10026 ACTCATGGGAGCAATCCGTCATGTGTGTGAAAAACGCGGGAAGTGAGGCCCGAATACGAG 10085 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1272 ACTCATGGGAGCAATCCGTCATGTGTGTGAAAAACGCGGGAAGTGAGGCCCGAATACGAG 1331 Query 10086 CGAAACTCACCTCGCATGTCGTCAAATTCCTACGTCAATCTGAAAATTGCAACCTGCCTC 10145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1332 CGAAACTCACCTCGCATGTCGTCAAATTCCTACGTCAATCTGAAAATTGCAACCTGCCTC 1391 Query 10146 GTCCGTTATGCGGACGACAGGCTCATTGATCAGCGTTTCCCTA 10188 |||||||||||||||||||||||||||||||||||||||| || Sbjct 1392 GTCCGTTATGCGGACGACAGGCTCATTGATCAGCGTTTCCTTA 1434 >seq2544 Length=182 Score = 172 bits (190), Expect = 1e-38 Identities = 149/182 (82%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 24722 ATGTCGTTGAATGGCGGGTAACTCTTAGAGTTTGCAGATATGCTTTCAGCGCCATCTTTG 24781 ||| |||||||||| ||||||||||| ||||| ||||||| |||||||| || ||| | Sbjct 2 ATGGCGTTGAATGGTGGGTAACTCTTCGAGTTCGCAGATAAACTTTCAGCTCCGTCTGGG 61 Query 24782 CTTCGGCGCTTCCATGCGGTGAACGTCGTAGTGCCCT-CGGGGGCATATTTGCCAAGCTC 24840 || ||||||||||| |||||||| ||| | | |||| | || ||||| ||||||||||| Sbjct 62 CTGCGGCGCTTCCACGCGGTGAAGGTCAT-GACCCCTGCAGGAGCATACTTGCCAAGCTC 120 Query 24841 AGCTCGGTCCTTTTCCGTGAGGTCGTCGAATGTGACCTGAACTTCGATGTCTTCGTCGGA 24900 |||| ||||| || || ||||| ||||||| |||||||| |||| ||||||||||| Sbjct 121 GTCTCGATCCTTGTCGGTAAGGTCAGCGAATGTAACCTGAACCTCGACGTCTTCGTCGGT 180 Query 24901 CG 24902 || Sbjct 181 CG 182 >seq1822 Length=168 Score = 154 bits (170), Expect = 4e-33 Identities = 135/168 (80%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 24867 CGAATGTGACCTGAACTTCGATGTCTTCGTCGGACGCGCCGAAGGAACAGTCCCTCTCGG 24926 ||||||| |||||||| |||| ||||||||||| ||| ||||| ||||||||| |||| | Sbjct 168 CGAATGTAACCTGAACCTCGACGTCTTCGTCGGTCGCCCCGAAAGAACAGTCCTTCTCCG 109 Query 24927 TGAGCAAACCCGGCCGCCCGTTAAAAAACCAGTCGAGTGCGCGGAGCACCGTGGATTTGC 24986 | || |||| || |||||||| |||||||||| || || ||||| ||||| |||| Sbjct 108 TTAGTGAACCGGGTTTGCCGTTAAAGTACCAGTCGAGGGCACGAAGCACAGTGGACTTGC 49 Query 24987 CGGTGCCGTTTGGCCCAATCAGCGTCGTGACGGAATCAAAAGGAATCG 25034 ||| ||||| ||||| || | |||||| | |||||| || ||||||| Sbjct 48 CGGCCCCGTTGGGCCCGATGAACGTCGTAATGGAATCGAAGGGAATCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119024771129096