Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq242 111 2e-19 >seq242 Length=12369 Score = 111 bits (122), Expect = 2e-19 Identities = 320/488 (66%), Gaps = 12/488 (2%) Strand=Plus/Plus Query 154602 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 154661 || ||||| || ||| ||| || |||||||| || |||| | || ||||| ||| | Sbjct 4839 ATTACAGGTTTCGATGGTATTTCTTTACAACCAAATTCAGGTGCTCAAGGTGAATATACT 4898 Query 154662 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 154721 || ||| | |||| | | |||| || | ||| || || | | || || ||| Sbjct 4899 GGTCTGAGGGTAATCAGATCCTACCTGGAAAGCAAAGGTGAAAATCATCGTAACGTGTGT 4958 Query 154722 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAA 154781 || || || | || || ||||| || ||||| ||| ||| | ||||| || | ||| Sbjct 4959 TTAATCCCTGTATCCGCTCATGGTACAAATCCGGCTTCTGCCGCTATGGCGGGTTTAAAA 5018 Query 154782 GTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAA 154841 ||||| |||||| ||| | ||||| |||| | || || |||| || Sbjct 5019 GTTGTTCCTGTCAACTGTTTGCAGGATGGCTCATTAGATCTGGTTGACTTAAAGAATAAG 5078 Query 154842 GCAATCATGAATA-CATTTGAA----CTGTCATGTATTATGATTACATACCCATCTACAC 154896 || |||| | |||| ||| || | | ||||| || || || || || Sbjct 5079 GC-----TGAACAACATTCGAAAGAACTAGCCGCCGTAATGATCACCTATCCTTCCACTT 5133 Query 154897 ATGGTGTATTTGAAACTAACATTAGACA-GATATGTAAGATCGTTCATGACAATGGTGGT 154955 | ||| |||||||| | ||| ||| | ||| | | ||||| ||| |||||| Sbjct 5134 ACGGTTTATTTGAACCAGGCATCCAACATGCTAT-TGATATCGTACATTCTTTTGGTGGA 5192 Query 154956 CAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAG 155015 || || ||| | ||||| || ||| | ||||| ||||| || ||| | ||| | || Sbjct 5193 CAAGTCTATTTGGATGGTGCTAATATGAATGCGCAGGTTGGGCTAACTTCACCCGGAGAT 5252 Query 155016 TATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGT 155075 |||||||||||| || || | || |||||||| ||||| | ||||| ||||| ||| Sbjct 5253 CTTGGTGCAGATGTTTGCCACTTGAATTTACATAAGACATTTTCCATTCCTCATGGTGGT 5312 Query 155076 GGAGGTCC 155083 || ||||| Sbjct 5313 GGTGGTCC 5320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579167577960640