Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04-
25] 6,246 sequences; 12,545,896 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq1059 145 1e-29
seq1257 134 2e-26
seq148 127 3e-24
seq533 120 4e-22
>seq1059
Length=424
Score = 145 bits (160), Expect = 1e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897
|| ||| |||| || || ||||| || |||| || ||| |||||| | ||| |||
Sbjct 423 AAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTATCGACAAC 364
Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957
|| || ||||| ||||| || ||||| || |||||||| |||||||||||||||| |
Sbjct 363 GTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTTT 304
Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGGCG 156017
||||||||||| || ||||| ||||| | || |||||||| || |||||| |
Sbjct 303 GCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAGTCT 244
Query 156018 ACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
||| | ||||| ||||| ||||| ||||| |||
Sbjct 243 ACGTTGCATTTGGTGTTGAGATTGAGAGGTGGT 211
Score = 129 bits (142), Expect = 9e-25
Identities = 157/212 (74%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| | || || || ||||| || |||| || ||| |||
Sbjct 210 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 151
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| |||| ||| || |||||||||||||| || ||||| || |||
Sbjct 150 GACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 91
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| |||||||||| ||| |||||||| || |||||| ||||| || || || || |
Sbjct 90 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACA-- 33
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTG 156032
| ||||||| || | || ||||| || |||
Sbjct 32 ACATCCAAAAGGAATCTACTCTTCACTTGGTG 1
>seq1257
Length=777
Score = 134 bits (148), Expect = 2e-26
Identities = 176/243 (72%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 155810 TTTATGTAATAAA--ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTA 155867
|||| ||||| | ||||| || || | || || ||||| || ||||| || |||||
Sbjct 325 TTTAACTAATAGATTATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTG 384
Query 155868 GAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGC 155927
||||| ||| ||| |||| || ||||| || ||||| ||||| || |||||
Sbjct 385 GAAGTTGAATCTTCCGATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGT 444
Query 155928 ATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACT 155987
|| |||||||| |||||||||||||| | ||||||||||||||| ||||| |||||
Sbjct 445 ATCCCTCCAGATCAACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACG 504
Query 155988 TTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGC 156047
| || ||||| || || || ||| | || | ||| | ||| |||| |||||||
Sbjct 505 CTGTCTGATTACAACATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGT 564
Query 156048 GGT 156050
|||
Sbjct 565 GGT 567
Score = 107 bits (118), Expect = 3e-18
Identities = 152/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| |||| || ||||| || ||||| || || ||||| || ||| ||
Sbjct 568 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 627
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || ||||| || || || ||||| || |||||||| |||
Sbjct 628 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 687
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||| | ||||||||||||||| ||||| ||||| || || || || |
Sbjct 688 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACA-- 745
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTG 156032
| ||||||| || | || ||||| || |||
Sbjct 746 ACATCCAAAAGGAATCTACTCTTCACTTGGTG 777
>seq148
Length=12247
Score = 127 bits (140), Expect = 3e-24
Identities = 158/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897
|| ||| |||| || || ||||| || |||| || ||| |||||| | |||| |||
Sbjct 12246 AAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTATTGACAAC 12187
Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957
|| || ||||| ||||| || ||||| || |||||||| || ||||||||||||| |
Sbjct 12186 GTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATTTTT 12127
Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA-GAGGC 156016
||||||||||| || |||||| ||||| | || || || ||||| || ||| ||| |
Sbjct 12126 GCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATAT-TCAAAAGGAGTC 12068
Query 156017 GACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || || || || || || |||
Sbjct 12067 CACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGT 12034
>seq533
Length=22649
Score = 120 bits (132), Expect = 4e-22
Identities = 168/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || || || || || |||||||| | ||||| ||| |
Sbjct 8448 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8507
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | |||| || || || || || ||||| || ||||| || || || ||
Sbjct 8508 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 8567
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| |||||||| | |||||| |||||||| || || ||
Sbjct 8568 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 8627
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| || | || || || || || || ||||| ||||| ||||
Sbjct 8628 A--ACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGTG 8679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731814859093600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |