Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq533 138 2e-27 seq1059 125 1e-23 seq1257 120 6e-22 seq487 98.7 2e-15 seq2144 96.9 7e-15 seq1094 95.1 2e-14 seq488 91.5 3e-13 seq493 89.7 1e-12 >seq533 Length=22649 Score = 138 bits (152), Expect = 2e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || |||| ||||| || || ||| || || || || Sbjct 8678 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 8619 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| |||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct 8618 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8559 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| || ||||| || || || ||||| |||| || || ||||| || Sbjct 8558 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 8499 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||| || ||||| || ||||| ||||| || || | || || ||||| || Sbjct 8498 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8448 >seq1059 Length=424 Score = 125 bits (138), Expect = 1e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 || || || | ||||| || || ||| || || ||||| || |||| |||| || Sbjct 2 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 61 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 | ||| ||||||||||| || |||||||||||||| || || || |||||||||||||| Sbjct 62 AGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGA 121 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 || ||| |||| || || |||| || || ||||| || ||||| || || || || Sbjct 122 ATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTC 181 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||| ||||| | || || ||||| Sbjct 182 CCTGTTAGAGTTTTGACGAAAATTTGCAT 210 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || ||||| || |||| |||||| || ||||||||| Sbjct 209 ATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCA 268 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| | || |||| ||| ||||| ||||| || ||||| |||||||| || Sbjct 269 GACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGA 328 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| || || || |||| || || ||||| Sbjct 329 GGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCA 388 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521 || ||||| || || || ||||| || | ||| || Sbjct 389 ACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTT 423 >seq1257 Length=777 Score = 120 bits (132), Expect = 6e-22 Identities = 171/240 (71%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| || | || || | |||||| || | ||| || || || |||||| Sbjct 569 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 510 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| | || || | || ||||| |||||||| ||||| |||||||| || Sbjct 509 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 450 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| || || || || | ||| || ||||| Sbjct 449 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 390 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT--TTTATTAG 192544 ||||| | || ||||||||||| || || || || | || |||||||| | |||||| Sbjct 389 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 330 Score = 111 bits (122), Expect = 3e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 || || || | ||||| || || ||| || || ||||| || |||| | || || Sbjct 776 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCT 717 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 | || ||||| |||||||| || ||||||||||| || || || ||||| || || || Sbjct 716 AGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGG 657 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 ||||| || || ||| || | || || ||||| || |||| ||| ||||||||| Sbjct 656 ATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTA 597 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || |||| ||| |||||||| Sbjct 596 CCGGTCAAAGTCTTAACAAAGATCTGCAT 568 >seq487 Length=17658 Score = 98.7 bits (108), Expect = 2e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 |||||||||||||| ||||| ||||| |||||||| || ||||| || ||||| || || Sbjct 17657 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTT 17598 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 || ||||| |||| || || ||||| ||||| | ||| ||||| |||||||| Sbjct 17597 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTC 17538 Query 192514 AATGTTTTAATAAA 192527 || || || | ||| Sbjct 17537 AAAGTCTTGACAAA 17524 >seq2144 Length=253 Score = 96.9 bits (106), Expect = 7e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||| ||||||||||| | | || || ||||||||||| | || || ||| | Sbjct 126 GTTCAATGATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGT 185 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | || ||||||| |||| | || |||||||| |||||||||||||| ||||| |||| Sbjct 186 TGTAGTCAGATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 245 Query 192419 GATCAGGT 192426 | |||||| Sbjct 246 GGTCAGGT 253 >seq1094 Length=17280 Score = 95.1 bits (104), Expect = 2e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 |||||||||||||| ||||| ||||| |||||||| || ||||| || ||||| || || Sbjct 17279 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTG 17220 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 || ||||| || | || || ||||| ||||| | ||| ||||| |||||||| Sbjct 17219 GACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTC 17160 Query 192514 AATGTTTTAA 192523 || || |||| Sbjct 17159 AAAGTCTTAA 17150 >seq488 Length=253 Score = 91.5 bits (100), Expect = 3e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||| ||||||||||| | | || ||||| || ||||| | ||||| || | Sbjct 126 GTTCAATGATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGT 185 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | || ||||| || |||| | || |||||||| |||||||||||||| ||||| |||| Sbjct 186 TGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 245 Query 192419 GATCAGGT 192426 | |||||| Sbjct 246 GGTCAGGT 253 >seq493 Length=13486 Score = 89.7 bits (98), Expect = 1e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 49821 AAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880 || |||||||| || || || ||||| ||||| ||| | || ||||| || ||| ||| Sbjct 419 AAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTT 478 Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940 || || ||||| | ||||||||||| | ||| || || || ||||| || || || Sbjct 479 AAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAA 538 Query 49941 AATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCT 50000 || | ||| || | | ||||| || | || |||| | ||||||| | | | ||| Sbjct 539 AAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCT 598 Query 50001 AATATCCAATTTATAGCCCAATCTGCTTT 50029 ||||| ||| |||||| || || || Sbjct 599 TGAATCCATCTTAAAGCCCATTCGGCCTT 627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984401215142100