Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq533 163 6e-35 seq1257 156 9e-33 seq1059 134 3e-26 seq148 132 1e-25 seq1094 129 1e-24 seq487 125 1e-23 seq2144 84.2 5e-11 >seq533 Length=22649 Score = 163 bits (180), Expect = 6e-35 Identities = 153/195 (78%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | | || | ||||| || | ||| || || ||||| Sbjct 8642 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 8583 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||||||| |||||||| ||||||||||||||||| | || || | Sbjct 8582 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 8523 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||| ||||| || || || |||||||| || |||||||| || Sbjct 8522 GTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 8463 Query 283088 GAATATCTGCATTTT 283102 ||| || ||||| || Sbjct 8462 GAAAATTTGCATCTT 8448 >seq1257 Length=777 Score = 156 bits (172), Expect = 9e-33 Identities = 152/193 (79%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| ||||||||||||||||||| |||| || | || || ||||| || || ||||||| Sbjct 759 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCTAGCTGCTTACCGGCAA 701 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 ||||||| | ||||| || || ||||| |||||||| ||||| || | || ||| Sbjct 700 AGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGT 641 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 ||||||| ||||| || | ||| || || | |||||| || ||||| ||||||||||||| Sbjct 640 TATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAA 581 Query 283087 CGAATATCTGCAT 283099 | || |||||||| Sbjct 580 CAAAGATCTGCAT 568 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | || || |||||||| ||| || || || |||||||| |||| Sbjct 567 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 508 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| | || || ||||| || || |||||||||||||| | |||||| || || Sbjct 507 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 448 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| ||||||||||| || || | || ||| | ||||| || || |||| ||| || Sbjct 447 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 388 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || || ||||| ||||||||||| ||||| |||||||| Sbjct 387 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 340 >seq1059 Length=424 Score = 134 bits (148), Expect = 3e-26 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| ||||| ||||| || ||||| || |||| ||||| | || || || Sbjct 230 ACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCC 289 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 ||||| || |||||||| ||||| | |||||| || |||||||| ||||||||||| Sbjct 290 AGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGA 349 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || || | || ||| | ||||||||||| |||| ||| || || || || || |||||| Sbjct 350 ATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTA 409 Query 283071 CCCGTCAAAGTCTT 283084 || |||| ||||| Sbjct 410 CCTGTCAGTGTCTT 423 Score = 129 bits (142), Expect = 1e-24 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| ||||||||||||||||||| |||| || | ||||| |||||||| || || |||| Sbjct 19 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCATCTTCTAGTTGCTTACCAGCAA 77 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 | ||||| | ||||| || || ||||| || || ||||| ||||| ||| ||| Sbjct 78 AAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTGACGT 137 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | || |||||||| |||| ||| || || || || || ||||| || || | ||| || | Sbjct 138 TGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGA 197 Query 283087 CGAATATCTGCAT 283099 |||| || ||||| Sbjct 198 CGAAAATTTGCAT 210 >seq148 Length=12247 Score = 132 bits (146), Expect = 1e-25 Identities = 135/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| || |||||||| | ||||| | ||||| |||||||| || |||||||| Sbjct 12071 TCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAA 12130 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||| ||||| |||||||| ||||||||||| || || | || ||| | Sbjct 12131 ATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTG 12190 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTT 283084 || |||||||| |||| ||| || || || || || |||||||| |||| ||||| Sbjct 12191 TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTT 12246 >seq1094 Length=17280 Score = 129 bits (142), Expect = 1e-24 Identities = 109/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || ||||||||||| | |||||||||| || ||||| ||||||||||||||||| Sbjct 17279 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTG 17220 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 | || || | || || ||||| |||| ||| ||||| | |||||| |||||||| ||| Sbjct 17219 GACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTC 17160 Query 283077 AAAGTCTTAACGAA 283090 |||||||||||||| Sbjct 17159 AAAGTCTTAACGAA 17146 >seq487 Length=17658 Score = 125 bits (138), Expect = 1e-23 Identities = 108/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || ||||||||||| | |||||||||| || ||||| ||||||||||| |||||| Sbjct 17657 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTT 17598 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 | || || | || |||||||| |||| ||| ||||| | |||||| |||||||| ||| Sbjct 17597 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTC 17538 Query 283077 AAAGTCTTAACGAA 283090 |||||||| || || Sbjct 17537 AAAGTCTTGACAAA 17524 >seq2144 Length=253 Score = 84.2 bits (92), Expect = 5e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| ||| ||| ||||||||||||||||||| || || | || || || Sbjct 155 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCC 214 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCA 282986 | ||| || || ||||||||||| | |||||||||| Sbjct 215 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046655432732884